Zingiber officinale (ginger): 122043436
Help
Entry
122043436 CDS
T08725
Name
(RefSeq) probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00030
Pentose phosphate pathway
zof00710
Carbon fixation by Calvin cycle
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01200
Carbon metabolism
zof01230
Biosynthesis of amino acids
Module
zof_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
zof_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
zof_M00165
Reductive pentose phosphate cycle (Calvin cycle)
zof_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
122043436
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
122043436
Enzymes [BR:
zof01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
122043436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
Motif
Other DBs
NCBI-GeneID:
122043436
NCBI-ProteinID:
XP_042459970
LinkDB
All DBs
Position
2A:complement(176265267..176268881)
Genome browser
AA seq
302 aa
AA seq
DB search
MAHAIAPASFSGAAPASSLPHRRNTAGFFFKQRPPVACSSPDLLAAAKLTVDKYVRSGMV
VGLGSGRASGLAIQYLGHRLRDGSLKDVVGVPTSVSSASKAAMAGIPLDNYQENLQIDFA
FDDADLIDKRTLTAVIGRRKLDGGESIIQEKSIIKRASGLAYIVTDNQYTGELGGSIPVL
ITSGNWLETAEQIDDLFLGDAELCKISYSWFVAKVWRRSLSGGAGPLGGDFPLVTKEGHH
VLDVIFTSPILDLGQVAESLDQVDGVVDHGIICRIPCTVIIASKEGLEVVDNMSKNQTTD
SL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgcaatcgcccccgcatccttctccggcgccgccccagcctcctcgcttccc
caccgccggaataccgccggcttcttctttaagcaaaggcccccagtggcgtgcagtagc
cccgacctcctcgcggccgccaaacttacggtggataagtatgtgaggagcgggatggtg
gtgggattggggtcgggacgcgcctccggattggccatacagtatcttggccaccgacta
cgagacggaagcctcaaggacgtcgtcggagtcccaacatctgtgtctagtgcaagtaaa
gcagcaatggcaggaattccactggacaattaccaagaaaatcttcaaattgattttgca
tttgacgatgctgatctaattgataagagaacattaaccgccgtgattggtcggagaaaa
ttggatggtggcgagtccataatccaagagaagtcaattataaagagagctagtggactt
gcttacattgtgactgacaatcaatatactggtgaacttggtggatctattccagtcctg
attactagtggtaattggctggaaactgctgaacaaatagacgatctgtttcttggagat
gccgagctgtgcaagatctcgtattcttggtttgttgcaaaggtgtggagaagatcacta
tctggaggtgccggccctctagggggcgacttcccattagttactaaagaaggacaccat
gttcttgatgtcattttcacgtctcctatactcgatctaggtcaagttgcagaaagcctg
gatcaagttgacggcgttgtggaccatggaatcatatgtcgcattccatgcactgtgata
attgcttcaaaggaaggattagaagttgttgacaacatgtcaaaaaaccaaaccactgac
agcttatga
DBGET
integrated database retrieval system
