Zingiber officinale (ginger): 122043442
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Entry
122043442 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122043442
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122043442
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122043442
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122043442
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122043442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
EnY2
Motif
Other DBs
NCBI-GeneID:
122043442
NCBI-ProteinID:
XP_042459976
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Position
2A:176347516..176353170
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AA seq
666 aa
AA seq
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MALQMTWHARFRKGGAAPLGLKNLGNSCYLNSVLQCLIYTPPLAQFCLSFRHSSLCKSVF
ANREECPFCILERQISRSLTLDGANTTEAPSKILKCLSLFAEHFRCGRQEDAHEFLRYVI
DACHNACIKIHKQSGGGGAIGGVVNVDSKVDERSVPSTVMKEIFGGALLSQVKCLACKGD
SNKVDEIMDICLDIFQSNSLKDALARFFQPEVLDGNNKYSCSNCKKLSVAKKQMFILRAP
NVLVIQLKRFEGVHGGKINRNIDFDELLGLSKFMSNTSQDPEPEYGLFGCIVHSGFSPES
GHYYAYIKDASGRWFCCNDAHISRSSSQEVLSEKVYMLFYIRTNCSPKTNKSALSCNGFK
PSIVNGSSVESQKTAETLKPMIANTNGASSTNNGSALLKNSEAISSPQFKPINLKNLETK
RTLPNDNGYFNIQKKRAIGEDTTTHACNSLSENKMLQKFETLTTSNFDAVNVDVSSDIVR
QQNKHAPLWPNGNGCSHPSDRHLNTEDTESAAAIRKGSSYSRSPKLMIDKHHKVYSEVHN
MKSRENPDTSSNGSTALPRENSSSKNQLSCEKRHSREIEKFKELLSGEASSELHSCGWVD
KVQDFMRAKKRQCMQAADTSYDKSLIRKQLISDAKKTFILQIPESLKERLIERLRSFSQE
TRLLDP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcagatgacatggcacgcgcgcttccgaaaggggggcgccgcccctctcggt
ctcaaaaacctcggcaactcctgctaccttaatagcgttctccagtgcctcatctacacg
cctcccctcgcccagttctgcctctccttccgccattcctcactctgcaagtcggtgttc
gcgaatcgggaggagtgcccattctgcatactcgagcggcagatctctcgatccctcact
cttgacggagcgaataccaccgaagcgccatccaagattctgaagtgcctatccctcttc
gcggagcatttccgctgcgggcgtcaggaagacgctcacgaattccttcgctatgtgatc
gacgcatgccataatgcctgcatcaagatccacaagcaaagtggaggtggtggagccatt
ggaggggtcgttaatgtagattctaaggtggatgagcgctctgtgcccagcacggtgatg
aaggagatttttggaggggcgttgctgagtcaggtgaagtgcctcgcttgcaagggggat
tcgaacaaagtggacgagattatggacatctgtctcgatattttccagagcaattccctg
aaggatgccctagctcgattctttcagcctgaagtattggatggcaacaataaatacagc
tgcagcaattgtaaaaaactatcagtagccaagaaacagatgtttatacttcgagcacca
aatgttctagtcatccaacttaagagatttgaaggcgtacatggtgggaagattaatcga
aacattgattttgatgagcttcttgggctttcaaagttcatgtccaatacaagtcaggat
ccggagccagagtatggtctttttggatgtatagtacactcaggtttctcaccagaatcg
ggacattattatgcttacattaaggatgcttctggtcgatggttctgttgtaatgatgcc
catatttcacgttcaagctcacaagaagttttatctgagaaggtttacatgcttttttat
atacgcactaattgttccccaaagacaaacaaatctgctttgtcttgcaatggattcaaa
ccttctattgtaaatggtagcagtgttgaaagccaaaagactgcagaaactttaaaacca
atgattgctaataccaacggggcatcttctacgaataatggttctgcattgctgaagaac
agtgaagctatttcatctccacaatttaaacccattaatctgaagaaccttgagacaaaa
aggactttgccaaatgataatgggtactttaatattcagaaaaaaagagctattggggaa
gacacaacaacacatgcatgtaattcccttagtgaaaataagatgttacaaaaatttgag
acattgacaacttctaatttcgatgcagttaatgtggacgtatcttctgatatagtcagg
caacaaaataagcatgcgcctctttggccaaatggaaatgggtgctctcatccatcagat
agacacctaaacacagaggacactgagtctgcagcagctataagaaaaggttctagttat
tccaggtcacctaaactgatgattgataagcatcataaagtttattcagaagtacacaat
atgaaaagcagagaaaatccagatacgagctctaatggttccactgctttgccaagggaa
aatagctcaagcaagaatcagttgtcatgtgagaaaaggcattctcgagaaattgaaaag
ttcaaagaactgctctctggagaagcctcttccgaattgcactcttgtggatgggtagat
aaagttcaagactttatgcgagctaaaaaaagacagtgcatgcaagccgcagacacgtct
tatgataagagtttgataaggaaacaattgataagtgatgcaaagaagactttcatattg
caaattcccgaatcactaaaggagcgcctcatcgaacgcctcagatcttttagtcaagaa
acacgtcttttggatccttga
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