Zingiber officinale (ginger): 122044053
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Entry
122044053 CDS
T08725
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122044053
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122044053
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122044053
NCBI-ProteinID:
XP_042460534
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Position
1B:complement(162257258..162258973)
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AA seq
447 aa
AA seq
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MESSRPKLLFLCFIFLASAASTTAHIAEYDEYWEKKAALARAASQAAYNPNPESVANTFN
ADVHREMDKAEVEHASTNSTRRGLRGRKKKGGPCVATNPIDRCWRCRGDWNKNRKRLAKC
ARGFGRHTTGGLAGRFYVVTDPRDDDMVNPRKGTLRWGVIQNRPLWIIFAKDMIIRLSEE
LIVNSNKTIDGRGVNVRIANGAGITIQYIHNVILHSLHIQDITQGNGGLIRDSETHYGLR
TRSDGDGISIFGSTNIWVDHVSMSNCGDGLIDAIMGSTAITISNSHFTQHNDVMLFGASD
AYSPDALMQITVAFNHFGRGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSKHPTILSQG
NRFFAPPNIHAKEVTKREYSPDNVWKDWSWRSEGDLMRNGAFFVPSGRDPDKSTFDQKDL
IKAKPGTFVARLTRYSGSLDCVRGQPC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggagtcatcaaggccaaagctcctcttcctctgcttcatcttcttggcctccgctgcc
tccaccaccgcccacatcgccgagtacgatgagtactgggagaagaaggcggcgctggcc
cgcgccgcgtcccaagccgcctacaaccccaaccccgagtccgtcgccaacaccttcaat
gccgatgtccacagggagatggataaggcggaggtggagcatgcgagcacgaacagcacg
aggagagggctgcgcgggaggaagaagaagggcgggccgtgcgtggcgacgaacccgatc
gaccggtgctggaggtgccgcggcgattggaacaagaaccggaagcggctggcgaagtgc
gcgagggggttcgggcggcacaccaccggcgggctggccgggcggttctacgtcgtgacc
gacccgagggacgacgacatggtgaacccgcggaagggaactctgcggtggggcgtgatc
cagaaccggccgctctggatcatcttcgccaaggacatgatcatccgcctcagcgaggag
ctgatcgtgaacagcaacaagacgatcgacggccgcggagtcaacgtccgcatcgccaac
ggcgccggcatcaccatccagtacatccacaacgtcatcctccacagcctccacatccag
gacatcacgcaggggaacggcggcttgatccgcgactccgagacgcactacggcctccgc
acccgcagcgacggcgacggcatctccatcttcggctccaccaacatctgggtcgaccac
gtctccatgtccaactgcggcgacggcctcatcgacgccatcatgggctccaccgccatc
accatctccaactcccacttcacccagcacaacgatgtgatgctgtttggagctagcgat
gcttactcgcccgatgcgctcatgcagatcaccgtcgccttcaaccacttcgggagaggt
ctcgttcagagaatgccaagatgccggtggggattcgtccacgtcgtgaacaacgactac
acccactggctgatgtacgcgatcggcggcagcaagcaccccaccattctcagccaaggg
aaccgattcttcgctccaccaaacatccatgccaaagaggtgacgaagagagagtactcg
ccggacaacgtctggaaggactggagctggaggtcggaaggtgacctgatgcggaacggg
gcgttcttcgtgccgtcgggaagggacccggacaagtcgacgttcgaccaaaaggatctg
atcaaggcgaagccgggaacgttcgtggccaggctcacgcgctactcgggctccctggac
tgcgtccgaggccagccctgctaa
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