Zingiber officinale (ginger): 122044210
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Entry
122044210 CDS
T08725
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122044210
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122044210
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Alpha-amy_C_pro
Motif
Other DBs
NCBI-GeneID:
122044210
NCBI-ProteinID:
XP_042460672
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Position
2A:complement(164919880..164921460)
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AA seq
385 aa
AA seq
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MEREFMCVAQSNGVYNVKDHGATGNGHTDDTKAFQAAWDASCAASGWSTMLVPEGSYSVG
PLAFKGPCKGVKRLELRGQLLASTNLNVYTNNWIDFQYIDGLIIYGGGIFNGQGASAWPH
NECPKKWSCKLLPMSLVFSFVSNAVVKNISSIDSKLFHMHIFSSKNLEFQSLKISAPGNS
PNTDGIHIADSTNITIANAIIGTGDDCISIGPGNTNLTILNVLCGPGHGISVGSLGKNSN
EKDVVGLTVRNCAFNGTTNGLRIKTWKSSPVPLTAAHFVYENIIMHDVYNPIIIDQEYCP
YVSCVEKDPSRVQIHDIKFTNVRGTSSSREAIKFVCSRSVPCASVELNDIDLHYTGDATG
NATATSTCVNIHGRSNGNVKPSSCI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagagagaattcatgtgtgttgctcaatcgaacggtgtttacaatgtgaaggatcat
ggagcgacaggaaatggccacaccgatgacacaaaggcttttcaagcggcatgggatgcc
tcgtgcgctgctagcgggtggtcgacgatgctagttccggagggatcgtactcggtcggt
cctctggcctttaaagggccttgcaagggtgtcaagaggttggaattgagaggacaacta
cttgcatcgactaacctcaatgtttacacaaacaattggattgatttccaatatatagac
ggactaatcatctacggaggtggaatattcaacgggcagggagcttcggcatggcctcac
aatgaatgccctaagaaatggagttgcaagctccttccgatgtcgttggtgtttagtttc
gtttcgaatgcagttgttaagaacatttcttcaatcgatagtaagctcttccacatgcat
atattttcatcgaagaatttggagtttcagtccttgaagattagtgctccggggaatagc
cctaacacggatggcatccacatagctgattccaccaatatcaccattgcgaatgcgatc
atcggcaccggtgacgattgcatctccatcggaccgggaaacaccaatttaacaatcttg
aacgtgttatgcggtcctggccatggcatcagcgttggaagtcttggcaagaactcgaat
gagaaagacgtggttggcttgacggttagaaattgcgctttcaatggcacaaccaatgga
ttaaggatcaagacatggaaatcttctccggttccattgacggccgctcactttgtctac
gagaacatcatcatgcacgatgtctacaaccccatcatcatagatcaagagtattgtccc
tatgtttcgtgtgttgaaaaggatccatctcgggttcaaattcacgatatcaagttcaca
aatgtgaggggaacttcttcctcaagagaagccataaaatttgtatgcagccgttcggtt
ccatgtgcaagtgtggagttaaacgacatcgacctgcattacactggcgatgcgaccggg
aacgcaactgcgacatcaacttgcgttaatattcatggaagatcgaatggcaatgtgaaa
cctagctcgtgcatttaa
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