Zingiber officinale (ginger): 122044211
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Entry
122044211 CDS
T08725
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122044211
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122044211
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Alpha-amy_C_pro
Motif
Other DBs
NCBI-GeneID:
122044211
NCBI-ProteinID:
XP_042460673
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Position
2A:164967693..165006634
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AA seq
464 aa
AA seq
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MGASSDEEPRSRLACATSNGVWNKAGGTVLGRAELPPECRSDLCSGPILRVAPADRLVLP
DRLMPTLPIALSAWLEPFAAARLSWCVAQSNGVYNVKDHGATGNGHTDDTKAFQAAWDAS
CAASGWSTMLVPEGSYSVGPLAFKGPCKGVKRLELRGQLLASTNLNVYTNNWIDFQYIDG
LIIYGGGIFNGQGASAWPHNECPKKWSCKLLPMSLVFSFVSNAVVKNISSIDSKLFHMHI
FSSKNLEFQSLKISAPGNSPNTDGIHIADSTNITIANAIIGTGDDCISIGPGNTNLTILN
VLCGPGHGISVGSLGKNSNEKDVVGLTVRNCALNGTTNGLRIKTWKSSPVPLTAAHFVYE
NIIMHNVYNPIIIDQEYCPYVSCVEKDPSRVQIHDIKFTNVRGTSSSREAIKFVCSRSVP
CASVELNDIDLHYTGDATGNATATSTCVNIHGRSNGNVKPSSCI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcctcgtcagacgaagagcctcggtcgaggttggcttgcgcgacttctaacggc
gtttggaataaagccggtggaacggtattggggcgggcggagcttccacctgagtgccgg
tcggacctttgttctggccccatattgagagttgctccggccgatcgtctagtgttgccc
gaccgcctgatgccgacgttgcctattgcgctatccgcttggcttgagccttttgctgct
gctcgactatcttggtgtgttgctcaatcgaacggtgtttacaatgtgaaggatcatgga
gcgacaggaaatggccacaccgatgacacaaaggcttttcaagcggcatgggatgcctcg
tgcgcggctagcgggtggtcgacgatgctagttccggagggatcgtactcggtcggtcct
ctggcctttaaagggccttgcaagggtgtcaagaggttggaattgagaggacaactactt
gcatcgactaacctcaatgtttacacaaacaattggattgatttccaatatatagacgga
ctaatcatctacggaggtggaatattcaacgggcagggagcttcggcatggcctcacaat
gaatgccctaagaaatggagttgcaagctccttccgatgtcgttggtgtttagtttcgtt
tcgaatgcagttgttaagaacatttcttcaatcgatagtaagctcttccacatgcatata
ttttcatcgaagaatttggagtttcagtccttgaagattagtgctccggggaatagccct
aacacggatggcatccacatagccgattccaccaatatcaccattgcgaatgcgatcatc
ggcaccggtgacgattgcatctccatcggaccgggaaacaccaatttaacaatcttgaat
gtgttatgcggtcctggccatggcatcagcgttggaagtcttggcaagaactcgaatgag
aaggacgtggttggcttgacggttagaaattgcgctctcaatggcacaaccaatggatta
aggatcaagacatggaaatcttctccggttccattgacggccgctcactttgtctacgag
aacatcatcatgcacaatgtctacaaccccatcatcatagaccaagagtattgtccctat
gtttcgtgtgttgaaaaggatccatctcgggttcaaattcacgatatcaagttcacaaat
gtgaggggaacttcttcctcaagggaagccataaaatttgtatgcagccgttcggttcca
tgtgcaagtgtggagttaaacgacatcgacctgcattacactggcgatgcgaccgggaac
gcaactgcgacatcaacttgcgttaatattcatggaagatcgaatggcaatgtgaaacct
agctcgtgcatttaa
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