Zingiber officinale (ginger): 122044242
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Entry
122044242 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122044242
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122044242
Membrane trafficking [BR:
zof04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
122044242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
122044242
NCBI-ProteinID:
XP_042460697
LinkDB
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Position
2A:169462494..169466296
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AA seq
539 aa
AA seq
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MAIDVRELANLANSSATWFSDRGIFSMMTSLKLAFSFSKSPTQFNMIGSGNLHPATEVEE
SDPSLFVPELALENICLSSAEVSDKTEDGHNDIPSSEMDEIFTSVMLQSPVHKTDATEDL
VKRKPAKYFYYDSPLYEETGFWIPVSANGGYFPEEEEDFGKEMTMWDVVSEMLLTLRGKA
ATLSSSDLTSRQMPRTSTELLEQTWKQMADTLSEADFGHAAEILETQPPKWLPDSAAAAC
MLCNARFHPITCSRHHCRFCGGIFCNGCSKGRSLLPPKFRVADPQRVCDVCDVRLESVQA
YSMNQISHASQLPTHDLTHLTTLRSWLNFPWGRTMEHEIYKAANILRAYTKVGSLKPEKS
IPDVILKQAKGLAILTVVNVGLVVTYKIGTGLVVCRREDGSWSPPSAISSVGFGWGAQVG
GELTDYIIVLRNTAAVKTFSSYGHLSVGAGVRAAAGIVGRTAEADVRAGDGGYAACYTYS
CSKGAFVGCALNGNMVNTRVSVNTCFYGAPVKASEILLGSMPRPPAAAILYRALCHLLP
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgacgtcagggagcttgctaatcttgccaactcatctgctacttggttctcc
gatcgggggatcttcagtatgatgacctccttaaagttggccttcagcttctcaaagtcg
cctactcaattcaatatgataggcagcggcaatctccaccccgcaacagaagtcgaggaa
tcagatccttccctgttcgtgccagagctagccctggagaatatatgcctttcgtctgct
gaggtatctgataaaacagaggacggccacaatgatatcccttcctctgagatggatgaa
attttcacttcagtaatgcttcaatctcctgttcataaaacggacgctactgaagatctc
gttaaaaggaaaccggccaaatatttctattacgattcaccactttacgaagaaactggc
ttttggattcccgtgtctgccaatggcggctactttcccgaggaagaagaagacttcggc
aaggagatgaccatgtgggacgtggtttctgaaatgcttcttacactccgtggcaaagcg
gccaccctcagttcgagcgacctaacgagtcgtcaaatgcctcgtacgtcaacagaactc
ttagagcaaacatggaaacagatggctgatactctgtcggaggctgactttggccacgcc
gcagagattttggaaacgcagccacccaagtggttgccggacagtgccgccgccgcttgc
atgctgtgcaatgcgcgcttccacccgatcacttgctcgaggcatcattgccggttttgc
ggcggcatattctgcaacggttgctctaaaggaagaagcttgctccctccaaaattcaga
gtggccgacccacaacgcgtctgcgatgtctgtgacgttcgattggagtcggttcaggct
tactcgatgaatcaaatcagtcacgcttcacaacttccgacccatgatttgactcacctc
accaccttgcgatcttggttgaacttcccatggggtcgaactatggagcatgagatttac
aaagcagcaaatatacttcgtgcatacactaaggttggatctttgaaacctgagaagtcc
atccctgatgttattctgaaacaagcgaaaggccttgcgatcctaaccgttgtcaatgtt
ggtctagttgttacttataaaattgggactggtcttgtcgtctgtcgacgagaagatggc
tcctggtctccaccctctgccatttcttcggttggttttggatggggagctcaggttgga
ggcgagctaacagactatataattgtattgaggaacacagccgccgtcaaaacttttagt
agctatgggcatttatcagttggtgccggagtgagggcagctgccggcattgttggacga
acggcggaggctgacgtacgtgcgggtgatggtggttatgctgcttgttacacgtacagc
tgcagtaaaggtgcatttgttggttgcgctctcaacgggaacatggtcaatactcgtgtc
tccgtgaacacctgtttctacggtgctcctgtcaaggcctccgagatacttttgggttcg
atgccgaggccgccggctgccgcgatcctctaccgtgctctatgtcatcttcttccttga
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