Zingiber officinale (ginger): 122044984
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Entry
122044984 CDS
T08725
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122044984
03036 Chromosome and associated proteins [BR:
zof03036
]
122044984
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122044984
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122044984
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122044984
microRNA pathway
RISC loading complex
122044984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122044984
NCBI-ProteinID:
XP_042460959
LinkDB
All DBs
Position
2B:1292178..1298731
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AA seq
908 aa
AA seq
DB search
MDPQVKPDPDNIESLPPPPSIPPNVNPMKATKPKRTPMARPGIGKKGNAVQLLTNHFKVS
LRNVDDYFYHYSVALKYEDDRPVDGKGVGRKVIDKLHQTYDTELGKKDFAYDGEKSLFTL
GALPQVNNEFTVVLEDLSSNRIPGNGNAGNNSPGESDHKRARRPKHTKTFKVLLSFAAKI
PMKSIAAALKGNETENSQEALRVLDIILRQHASKQGCLLVRQSFFHNNPKSFTDIGGGVM
GCRGFHSSFRTSQGGLSLNIDVSTTMIVRPGAVVDFLLANQNVKNPNQLDWNKARRTLKN
LRVKTTHTNQEFKIIGISDKPCKDEIFTLKLRNGNDGNGNSDTVEVTVYDYFVRHRRMQL
SYSADFPCLNVGKPKRPTYVPLELCSLVSLQRYTKSLSTFQRAALVEKSRQKPQERMSVL
SEALRNNNYDADPLLRASGVSIATNFTQVEGRVLQPPRLKVGNGEDFMPSRGRWNFNQKK
LIEPSQVNRWAVVNFSARCDISSLIRDMLKCANMKGISMEEPFQHFFEESPSMRRAPPVA
RVEDMFQQVKQNLPGAPKFLLCILAERKNSDIYGPWKRKCLAEFGIVSQCIAPTRVNDQY
LTNVLLKINAKMGGINSYLSIERSSNIPLVSDTPTIILGMDVSHGSPGHSDIPSIAAVVS
SRQWPSISRYRASVRTQSPKVEMIDSLFKPVGEKDDSGIIRELLVDFYTSSGKRKPENII
IFRDGVSESQFIQVLNIELDQIIEACKFLDEQWSPKFTLIIAQKNHHTKFFLPNSPDNVQ
PGTVIDNKICHPRNYDFYMCAHAGMIGTTRPTHYHVLMDEIGFSADALQELVHSLSYVYQ
RSTTAISVVAPICYAHLAAAQIGQFVKFEDLSDSSSSQGGQQHTAPGAVPVPELPRLHEN
VSSSMFFC
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcaggttaagcctgaccctgataacatcgaaagtttgccaccgcctccttcc
attcctcctaatgttaaccccatgaaggctacaaaacctaaaagaactccaatggctaga
cctggcattggaaaaaagggcaatgctgtgcagcttttgactaatcattttaaagtttct
ctcagaaacgtggatgattatttttaccactacagtgtggcactgaaatatgaggatgat
cgtcctgtggatgggaagggtgttggaaggaaagttattgacaaactgcaccagacatat
gacactgagttaggaaaaaaggattttgcatatgatggtgagaagtctctattcacccta
ggtgcccttcctcaagtcaacaacgaattcactgtggtgcttgaggacctgtcctcaaac
agaattcctggcaatggaaatgctggaaataatagtccaggtgaaagcgatcacaaacgt
gccagacgtccgaagcatactaaaaccttcaaggttttgttgagttttgcagctaaaata
cctatgaagtccattgctgcagccttgaaaggcaatgaaaccgagaactctcaggaggca
ttacgggttcttgatattattctgcgacagcatgcttcaaaacagggatgccttcttgtg
agacaatcattttttcacaacaatcctaaaagctttactgacattggtggtggagtcatg
ggatgcagaggttttcattcaagtttcagaacttcacaaggaggactttctttgaatatt
gatgtctctactactatgattgtgaggcctggcgcagtggttgattttctacttgcaaat
caaaatgtcaagaatccaaatcaactggactggaacaaggctagaagaactttgaaaaat
ttgagagtgaagacaactcatacaaatcaagaatttaaaatcattgggataagtgacaag
ccttgcaaagatgaaatattcactctaaagctgagaaatggaaatgatggaaatggaaat
tcagatacagttgaagtaactgtttatgattattttgtgagacatcggagaatgcaattg
agttactctgctgattttccttgcttaaatgttggaaaaccaaaaagaccaacatatgtg
ccccttgagctctgttccttggtttcactgcaaagatataccaaatcactgtcaacattt
caacgagctgccctcgtggaaaagtcaaggcagaagcctcaagaacgaatgagtgtcctc
agcgaggctttgaggaacaataattatgatgctgacccactgctacgtgcatctggtgtt
agcattgccaccaattttactcaagtagaaggcagagtattgcagcctccccggctcaaa
gttggcaatggagaggactttatgccatcaagggggagatggaattttaaccaaaagaaa
ttgattgagccatctcaagtcaaccgttgggctgttgttaatttctctgctcgatgtgat
atctcaagcctcatacgtgacatgctcaaatgtgcaaatatgaagggcatttcaatggaa
gaaccttttcagcatttttttgaggaaagtccttcgatgagaagggctccacctgttgcc
agagtggaggacatgttccagcaagttaagcagaacttacctggtgctccaaagtttctt
ctatgcattttagctgagaggaagaattcagatatttatggtccttggaagcgcaagtgt
ctagctgaatttggaattgtttctcaatgtatcgcccctacaagagtcaatgatcagtac
cttaccaatgtgctccttaaaatcaatgcaaagatgggtggtataaactcttatttgtca
attgaaagatcatcaaatattcctctagtctcagatacaccaacaatcattttgggcatg
gatgtttcccatggatctcctgggcattcggatattccttctattgctgcggttgtaagc
tcgaggcaatggccatctatttcacgctatagagcttctgtgcgaacacaatctcccaag
gttgaaatgatagactcactttttaagcctgtaggagagaaagatgacagtggcataatt
cgggagctgctggttgatttctacaccagttcaggaaaaagaaaaccagaaaacattatc
attttcagggatggtgttagtgaatcacagtttattcaggtcctcaacattgaattggat
cagattattgaggcctgcaagtttcttgatgaacagtggtctccaaagtttacattaata
attgcccaaaaaaatcatcataccaagtttttccttccaaattcgcctgacaatgtccaa
cctgggacggttattgataacaaaatttgtcatccaaggaattatgacttttacatgtgc
gctcatgccggcatgattggcacaacccggcccactcattaccatgtgctaatggatgag
attgggttttctgccgatgccctgcaagagcttgttcattcgctttcttatgtatatcag
aggagcacaactgcaatatctgttgttgcacccatctgttatgctcacttggctgctgct
caaattgggcaatttgtgaaatttgaagatttatctgattcttcatccagccaaggtgga
cagcagcatactgcacctggagcagttcctgtcccggaactacctcgtttacatgagaat
gtgtctagctccatgttcttctgttga
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