Zingiber officinale (ginger): 122044989
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Entry
122044989 CDS
T08725
Name
(RefSeq) protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122044989
03036 Chromosome and associated proteins [BR:
zof03036
]
122044989
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122044989
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122044989
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122044989
microRNA pathway
RISC loading complex
122044989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
122044989
NCBI-ProteinID:
XP_042460964
LinkDB
All DBs
Position
2B:1486355..1492529
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AA seq
913 aa
AA seq
DB search
MDPQVKPDPDNFDNLPPPPSIPPNVNPMKATKPKRSPMARPGIGRKGNAVQLLTNHFKVS
LRNVDDYFYHYSVALKYEDDRPVDGKGVGRKVIDKLHQTYDTELGKKDFAYDGEKSLFTL
GALPQVNNEFTVVLEDLSSNRIPGNGNTGNNSPGESDHKRARRLKHTKTFKVLLSFAAKI
PMKSIAAALKGNETENSQEALRVLDIILRQHAAKQGCLLVRQSFFQNNPKSFTDIGGGVM
GCRGLHSSFRTSQGGLSLNIDVSTTMIVKPGAVVDFLLANQNVKNPNQLDWNKARRTLKN
LRVKTTHTNQEFKIIGISDKPCKDEIFTLKLRNGNDGNGNSDAVEVTVYDYFVRHRRMQL
SYSANFPCLNVGKPKRPTYVPLELCSLVSLQRYTKSLSTFQRASLVEKSRQKPRERMSVL
GDALRSNNYDADPLLRACGVSIATTFTQIEGRVLQPPRLRVGNGEEFMPSRGRWNFNQKK
LMEPARITRWAVVNFSARCDVSSLIRDMLKCANMKGISMEEPFQHIFEENPSMRRAPPVA
RAEEMFRQVKQNLPGDPKFLLCILSERKNSDIYGPWKLKCLTADPGIISQCIAPTRVNDQ
YLTNVLLKINAKMGGINSYLSLERSSAIPLVSDTPTIILGMDVSHGSPGHSDIPSIAAVV
SSRQWPSISRYRASVRTQSPKVEMIDSLFKPVIGNTGEKYDNGIIRELMVDFYNSSGKRK
PENIIIFRDGVSESQFTQVLNIEFDQIIEACKFLDEHWSPKFTLIIAQKNHHTKFFLPNS
PDNVQPGTVIDNKICHPKNYDFYMCAHAGMIGTTRPTHYHVLMDEIGFSVDSLQELVHSL
SYVYQRSTTAISVVAPICYAHLAAAQVGQFVKFEDLSDSSSSQGGRQHTAPGAIPVPELP
RLDENVSSSMFFC
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcaggttaaacctgaccctgataactttgataatttgccaccgcctccttcc
attcctcctaatgttaaccccatgaaggccacaaaacctaaaaggagtccaatggctaga
cctggcattggaagaaagggcaatgctgtgcagcttttgacaaatcattttaaagtttct
ctcagaaacgtggatgattatttttaccactacagtgtggcactgaaatatgaagacgat
cgtcctgtggatgggaagggtgttggaaggaaagttattgacaaactgcaccagacatat
gacactgagttaggaaaaaaggattttgcatatgatggtgagaagtctctattcaccctt
ggtgcccttcctcaagtcaacaacgaattcactgtggtgcttgaggacctgtcctcaaac
agaattcctggcaatggaaacactggaaataatagtccaggtgaaagcgatcacaaacgt
gccagacgtctaaagcatactaaaaccttcaaggttttgttgagttttgcagctaaaata
cctatgaaatccattgctgcagccttgaaaggcaatgaaactgagaactctcaggaagct
ttacgggttcttgatattattctgcgacagcatgctgcaaaacagggatgtcttcttgtg
agacaatcattttttcaaaacaatcctaaaagctttactgacattggtggtggagtcatg
ggatgcagaggtcttcattcaagtttcagaacttcacaaggaggactttctttgaatatt
gatgtctctactactatgattgtgaagcctggcgcagtggttgactttctcctcgcaaat
caaaatgtcaagaatccaaatcaactggactggaacaaggctagaagaactttgaaaaat
ttgagagtgaagacaactcataccaatcaagaatttaaaatcattgggataagtgacaag
ccttgcaaagatgaaatattcactctaaagctgagaaatggaaatgatggaaatggaaat
tcagatgcagttgaagtaactgtttatgattattttgtgagacatcggagaatgcaattg
agttactctgctaattttccttgcttgaatgtcggaaagccaaaaagaccaacatatgtg
ccccttgagctctgctccttagtatcactacaaagatataccaaatctctatcaacattt
caaagagcttcccttgtggaaaagtcaaggcagaagcctcgagaacgaatgagtgtcctc
ggcgatgctttgaggagtaataattatgatgctgacccattgctacgtgcatgtggtgtt
agcattgccaccacttttactcaaatagaaggcagagtattgcagcctccccggctcaga
gttggcaatggagaggaatttatgccatcaagggggagatggaattttaaccaaaagaaa
ttgatggagccagctcgaatcacccgatgggctgttgttaatttctctgctcgatgtgat
gtttcaagcctcatacgtgacatgctcaaatgcgcaaatatgaagggcatttcaatggaa
gaacctttccagcatatttttgaggaaaatccttcgatgagaagggccccacctgttgcc
agagcggaggaaatgttccggcaagttaagcaaaacttacctggtgatccaaagtttctc
ctctgcattttatctgagaggaagaattcagatatttatggtccatggaagctcaaatgt
ctaactgctgatcctggaattatttctcaatgtatcgcccctacaagagtgaatgaccag
taccttaccaatgtgctgcttaaaatcaatgccaagatgggtggtataaactcttacttg
tcacttgaaagatcatcagctattcctctagtctccgatacaccaacaatcattttgggg
atggatgtttcccatggatctcctgggcattcggatattccttcaattgctgcggttgta
agctcaaggcaatggccatctatttctcgctatagagcttctgtgcgaacacaatctcct
aaggtcgaaatgatagactcactttttaagcctgtaatagggaatacaggagagaaatat
gacaatggcataattcgggagctgatggttgatttctacaacagttcaggaaaaagaaaa
ccagaaaacattatcattttcagggatggtgttagtgaatcacagtttactcaagtcctc
aacattgaatttgatcaaattattgaggcctgcaagtttcttgatgaacactggtctcca
aagtttacattgataattgcccagaaaaatcatcataccaagtttttccttccaaactca
cccgacaatgtccaacctgggactgttatcgataacaaaatttgtcatcctaagaactat
gacttctacatgtgtgctcatgctggcatgattggcacaactcggcccactcattaccat
gtgttaatggatgagattgggtttagtgttgattctctgcaggagcttgtccattccctt
tcttatgtatatcagaggagcacaactgctatatctgttgttgcacccatctgttatgct
cacttggctgcggcacaagttgggcaatttgtgaaatttgaagatttatctgattcgtca
tccagccaaggtggacggcagcataccgcacccggagcaattccagtgccggaacttcct
cgtttagatgagaatgtttctagttccatgttcttctgctga
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