Zingiber officinale (ginger): 122045060
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Entry
122045060 CDS
T08725
Name
(RefSeq) protein spotted leaf 11-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122045060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122045060
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122045060
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
U-box type E3
122045060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
KAP
Arm_2
HEAT_2
zf-RING_UBOX
ARM_LIN_C
zf-C3HC4_4
Neurochondrin
zf-Nse
iPGM_N
MLKL_N
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
122045060
NCBI-ProteinID:
XP_042461047
LinkDB
All DBs
Position
2B:2375684..2379331
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AA seq
682 aa
AA seq
DB search
MKADIERASEAQSEGEAVVRRLAMTAEEIAAISDFRNAYRKPLCSLARRIRLLEPMFHEL
ADGRDPIPESAARALAELEKSLTAAKDLLWHGSVGSKIFVVLERDNMMKKFEDVTTQLDQ
ALNGIPFDELDISEEVIEQVELIHAQFKKAKERDEMPDAELYSDLLSLYNKSNDTNLDPS
TLSRLAENLQLVTISDLKQESLALHEMVFASGGGDPGENIEKMSMLLKKIKDFVQTQNPE
MGTESDVKPFLQDRKPKVPILPDEFRCPISLELMKDPVIVATGQTYERTCIEKWLASGHD
TCPKTQQKLSTTFLTTNYVLRSLIEQWCEANGVDPPKCPIQSNNPTLEHSHVAALLHKLS
SRNIDDQQSAAGELRLLAKRDAENRIYIAKAGAIPLLVKLLLSTDPRTQEHAVTALLNLS
IHDNNKTSIISSGAIPRIVLVLRNGSMEARENAAAALFSLSVVDEYKVTIGASGAIPALI
SLLSEGTRRGKKDAATALFNLCIYQGNKGKAVRAGVVPLIMGLLKEPSEPMKDEALAILT
LLSSHPEGKSALADAQAVPLLIEMIECGSSRNRENAAAGLLNLCDNGEHQFSSLAAAQSC
GAMGPLQELAINGTERGKRKAVQLIERMSLFLVQQHEAQALAEASEGPPDGSPAHEQREC
ATPTQDDDHGEHVGLLAAYHAC
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggatatcgagagggcgtcggaggcgcagtcggagggggaggcagtcgtgcgg
cgattggcgatgacggcggaggagatcgccgccatctccgacttccggaacgcttacagg
aagccgctgtgcagcctggcgcggcggataaggctcctggagcccatgttccacgagctc
gccgatgggagagatccgatcccggagtcggcggcgcgggccctggcggagctcgagaag
tcgctcacggccgccaaggatcttctctggcacggaagcgtgggtagcaagatcttcgtg
gtcctggaaagggataacatgatgaaaaaatttgaggatgtaactactcagcttgatcaa
gcacttaatgggattccttttgatgaacttgatatatcagaagaagtaatagaacaggtc
gagcttatccatgcacagtttaaaaaagccaaagaacgtgatgaaatgcccgatgctgaa
ctttactccgatctcttatctttgtacaataagagcaatgacaccaatctagacccatct
accttgagccgattggctgagaacttgcagctagttacaatatctgatcttaaacaagaa
tcactagctttgcatgagatggtctttgcaagtggaggtggagaccccggcgagaacatc
gaaaagatgtcgatgctattgaagaaaataaaggattttgtgcagacacagaaccctgaa
atgggcaccgagtcagatgtgaagccttttcttcaagatagaaagccaaaagtccctatt
cttcctgatgaattccgttgtccgatatctttggaattgatgaaggatccagtcattgtt
gctaccgggcagacttatgagcgcacatgcatcgaaaaatggctggcctccggacatgat
acatgtccaaagactcaacagaaactatctactacatttctaacgacgaattatgtcctc
cgaagcctcatagaacaatggtgtgaagcaaatggcgtggatccacccaaatgcccaatt
caatccaataatcccacacttgaacattcacatgtagctgcactccttcacaagttatca
tccagaaatattgacgaccaacaatcagctgctggtgagcttcgtctcttagctaagcgc
gatgctgagaaccgaatttacatagccaaggccggtgctattcctctccttgtgaagctg
ctattgtcaacagatccacgcacccaggaacatgctgtcactgctcttctgaatctgtcc
atccatgacaataacaaaacaagcataatctcttcaggcgctataccgcgtattgtcctt
gtcctgagaaatggtagcatggaagcgagggagaatgctgcagccgcactcttcagccta
tcagttgttgatgaatataaggtgacaattggggcctcaggcgcgatcccagcattgatc
tcgcttctgagcgaaggcacacgcagaggcaagaaggatgctgctactgcattgtttaac
ctgtgcatataccaagggaacaaggggaaggcagtgagggctggcgtggttccactaatt
atggggctcttgaaggagccctctgaacccatgaaggacgaagccttagcaatattaaca
ttgctgtcgagccacccggaagggaagtcagcacttgcagatgcacaagctgttcctcta
ctgatagaaatgatagaatgtggttcttccaggaacagagagaatgcagcagctggcttg
ctcaacctatgcgacaacggagagcatcagttcagtagccttgcggcagcacaatcgtgt
ggtgccatgggtccgctgcaagagctggcgatcaatggcacggaaagggggaagaggaaa
gctgtgcagttgatagagcgcatgagtctgttcttggtgcaacagcacgaggcacaagct
ctagcagaggcttcagaagggcctccggacggctcccctgctcatgaacaaagagagtgt
gcaactccaactcaggatgatgaccacggtgagcatgttgggttactggctgcatatcat
gcctgttga
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