Zingiber officinale (ginger): 122045093
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Entry
122045093 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122045093
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122045093
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122045093
03036 Chromosome and associated proteins [BR:
zof03036
]
122045093
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122045093
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122045093
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122045093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
PI_PP_I
Motif
Other DBs
NCBI-GeneID:
122045093
NCBI-ProteinID:
XP_042461093
LinkDB
All DBs
Position
2B:complement(3119897..3123392)
Genome browser
AA seq
502 aa
AA seq
DB search
MWKQFLCKLPRKSSKSDSSGSNVTTSSNGKPIHRTSSGSLVPSRSTTVKRTASSIFPSSV
VTSIEPLLLFKDVPNTEKQNLLINKLNLCYVIFDFSDPNRNSAEKDMKRQALLDIIDYVD
TGGSRFTEPTIAAICKMFASNLFRVFPPNTRSSTGGAETEEEEPVFEPAWSHLQLVYDLL
LKFIESSSLDAKIAKKYVDHTFIVRLLHLFDSEDPRERDCLKAILHRVYGKFMAHRPFIR
KMISNVFYQFMFETNRHNGIAELLEVFGSIISGFALPLKEEHKLFLCKVLIPLHKPKTLG
IYHQQLTYCVIQFVEKEPKLVTSVLNGLLRYWPVINSQKEVMFLSELEEILETTNDVDIQ
KCVLPLFRRVGCCINSSHFQVAERALLMCNNDRVINLVSHNRQVVMPLILPALERNILTH
WNQGVLNLTQNVNKVLCEMDEELFLACKRNFEEEETKQELTEQNRRMAWEYLETAAAFQP
VTRNVAVLVKPVISPPVVAALS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcaattcctctgcaaattacctcgaaagtcttccaaatctgattcttccggc
agcaatgtgacgacctcttcgaacgggaagccaatccatcggaccagcagtggcagttta
gttccctcccgatcaaccactgtcaagcggactgcttcttccatcttcccgtcaagtgtt
gtcacaagcatcgaacctctacttctattcaaggatgtccccaacacggaaaagcagaac
cttttgatcaataaattgaatctctgttacgttatcttcgatttctcggatcccaacagg
aactctgctgagaaggatatgaaacggcaggcattattagacatcatcgattatgttgat
actgggggttctcgcttcacggaacccaccattgctgctatctgtaagatgttcgccagc
aacttgtttagggtcttcccaccaaatactcgatccagtactggcggcgcggagactgaa
gaagaagaacccgtgtttgaaccagcttggtcccatctgcaacttgtctatgatttgctc
cttaagttcatagagtcatcctcacttgatgccaaaattgcgaagaagtatgtggatcat
acattcattgtgagactgctacacctctttgattccgaggatcctagggagagggattgc
ttgaaagcaatcttgcacagggtctatggaaaattcatggcacatcggcctttcatccgg
aaaatgataagcaatgtattttaccagtttatgtttgagacaaaccgacataacggtatt
gctgaattgttagaagtttttggtagtatcatcagtgggtttgcattacctctaaaagag
gagcataaactgttcttgtgtaaggtcctaattccactgcacaagccaaaaacactaggt
atctatcatcaacaactgacttattgtgtgatacaattcgtcgagaaagagcctaagctg
gtaacatcagttctaaatgggttattgagatattggcctgtgattaacagtcagaaggaa
gttatgtttttaagtgagttggaagaaattttggagactacaaatgatgtggatatccaa
aagtgtgtgcttccgctgttccgtagggttggatgctgcattaatagttctcatttccag
gttgcagagagggccttactcatgtgcaacaatgaccgagtgattaatctggtgtcgcac
aatcgacaagtagtaatgccgctaatcttgccggctttagagaggaacattctcactcat
tggaatcaaggtgttttgaacttgacacaaaacgttaacaaggtattatgtgagatggat
gaagagctatttctggcctgcaaaaggaacttcgaggaggaggaaacgaagcaagaatta
acggagcagaaccgaaggatggcctgggagtacttggagactgccgcggctttccaacca
gtaactagaaatgtagccgtcctggttaaacctgttatttctccaccagtcgttgccgca
ctctcttaa
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