Zingiber officinale (ginger): 122045294
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Entry
122045294 CDS
T08725
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
zof03013
Nucleocytoplasmic transport
zof03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122045294
03008 Ribosome biogenesis in eukaryotes
122045294
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122045294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122045294
03009 Ribosome biogenesis [BR:
zof03009
]
122045294
03016 Transfer RNA biogenesis [BR:
zof03016
]
122045294
03036 Chromosome and associated proteins [BR:
zof03036
]
122045294
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122045294
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122045294
Pre-60S particles
122045294
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122045294
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122045294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
Motif
Other DBs
NCBI-GeneID:
122045294
NCBI-ProteinID:
XP_042461382
LinkDB
All DBs
Position
2B:11740003..11765511
Genome browser
AA seq
1075 aa
AA seq
DB search
MAERLRDLSQPIDVPLLDATVGAFYGTGSKEERSAADQILRELQNNPDTWLQVVHILQNS
QNLNTKFFALQVLENVIKYRWNALPAEQRDGIKNYISDVIVQLSSNETSFRKERLYVNKL
NVILVQVLKHEWPARWQSFIPDLVSAAKSSETICENCMAILKLLSEEVFDFSRGEMTQQK
IKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLEIL
LKFFPMGSYRNLTLQCLTEVAALQFGDFYDAQYVKMYTIFMAQLQTIIPHGTNFAEAYTN
GSSEEQAFIQNLALFFASFFKCHIRVLESAPANRGGLLMGLEYLIGISYVDDTEVFKVCL
DYWNLLVLELFEAHHNLENPTLSASLMGLQTTLMPEMVDGLGSPLLQRRQLYSVPLSKLR
TLMICRMAKPEEVLIVEDENGNIVRETMKDIDVLVQYKIMRETLIYLSHLDHEDTEQQML
KKLNKQLSGEEWSWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDNK
AVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKR
KFVTTQVGENEPFVSELLSSLSITVADLQPHQVHSFYESVGHMIQAEPLPAKRDEYLRRL
MDLPNQKWAEIIGQASRSVDVLKDQDVIRTVLNILQTNTSAASSLGTYFFPQISLVFLDM
LTVYRMYSELISNSIAEGGPFASKTSFVKLLRSVKRETLKLIETFIDKAEDQSHIGKQFV
PPMMDPVLGDYARNLPDARESEVLSLFATIINKYKIVMMEYVPRIFEAVFQCTLEMITKN
FEDYPEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVMDSIIWAFRHTERNIAETGLNLL
LELLKNFQVSEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVDSGAL
TEPLWDTSTVPYPYSNNTMFVRDYTIKLLGSSFPNMSVAEITHFVTGLFESKNDPPNFKN
HIRDFLVQSKEFSAQDNKDLYAEEAAAQREQERQRMLSIPGLIAPNELQDEMLDS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagattgagggatttaagccagccgatcgacgtgcccctgctcgatgcgacc
gtgggcgcattttacgggacgggatccaaggaagagaggtcagctgcagaccagatactg
cgagaattgcaaaacaaccctgacacctggctacaagtggttcacattctacaaaattca
caaaacttaaataccaagttttttgccctacaggtactagaaaatgtcattaaatacaga
tggaatgccttgccagctgaacaacgggatggaataaagaattacatatctgatgtcatt
gtacagctttctagtaatgaaacctctttccggaaggagcgattgtatgttaataagctt
aatgtcatattagtgcaggtcttaaagcatgagtggccagccagatggcagagcttcatt
cccgatcttgtctcagctgcaaagagcagtgaaacaatttgtgaaaattgtatggctata
ctgaagcttttgagtgaagaggtttttgatttctcaagaggagagatgactcaacaaaaa
ataaaagaactgaagcagtcattaaatagtgaatttcaactcatccatgagttatgctta
tacgtactatcagcctctcaaagaacagagcttatcagggctactttggcaacacttcat
gcctttctatcatggattccacttggctatatatttgaatctccactgctggagatactc
ttaaaattctttcccatgggatcataccggaaccttactcttcagtgtttgacagaggtt
gcggcccttcaatttggcgacttttatgatgcacagtatgtgaagatgtatacaatattt
atggcacaattgcagacaattattcctcatggtacgaattttgcagaagcatacacaaat
ggttctagtgaagagcaggctttcattcaaaaccttgcgctcttttttgcttcatttttc
aagtgtcacatccgagtactggaatcagctcctgcaaatagaggtggattattgatgggc
ctcgagtaccttattggtatttcatatgttgatgacactgaagttttcaaggtttgcttg
gactattggaatttattggtacttgagctgtttgaagcgcatcacaacttggagaaccct
actctttcagcaagcttgatgggtcttcagacgacactcatgcctgagatggttgatggc
cttggttctcctcttcttcagaggcggcaactttattcagttccattgtccaagttaaga
acactcatgatttgtcgtatggctaagccggaagaggttttgattgttgaagatgaaaat
ggaaatatagtccgtgaaactatgaaagacatcgatgtccttgttcagtataagataatg
cgggaaacattaatatatttgtctcaccttgatcatgaggacacagagcaacagatgttg
aagaagttgaacaaacaattgagtggagaagaatggtcctggaacaacttaaacacatta
tgctgggccatcggatccatatcaggatcaatgatggaagaacaggaaaatagattttta
gtaatggtcattcgtgatttactgaatctttgtgaaatcacaaaaggaaaagataacaag
gctgttattgcgagtaatatcatgtatgttgtgggacaatatccgaggtttcttcgagcc
cattggaagtttctcaaaacagttgttaataaattatttgagtttatgcatgaaactcac
ccaggtgtccaggacatggcttgtgatacttttctgaaaattgtccagaaatgcaagcgc
aaatttgtaaccactcaggttggagaaaatgagccattcgtttctgaacttttatctagt
ttatccattactgttgcagatcttcagcctcatcaggttcactcattctatgaatctgtt
ggtcatatgattcaagctgaaccccttcctgccaagagagatgaatatctgagaagattg
atggatctcccaaatcagaaatgggctgaaataattgggcaagcaagtcgcagtgtagat
gtcctgaaagatcaagatgtcataagaacagttcttaacatcttgcagacaaatactagt
gctgctagttctctgggaacatatttcttcccacaaatttccctggtatttttggacatg
cttaccgtctacagaatgtacagtgaattaatatctaacagtattgctgaaggtggtcct
tttgcttcaaaaacatcttttgttaagcttttgcgatctgtaaaacgggagacacttaag
ctgattgaaacatttatagacaaagctgaagatcagtcacacattggtaagcagtttgtg
ccgcctatgatggatcctgttcttggtgattatgccagaaacttgccagacgctagggaa
tctgaagtattatcactctttgcaaccatcataaacaagtataaaattgtgatgatggag
tatgtacctcgcatatttgaagctgtatttcaatgtactcttgagatgatcaccaagaat
tttgaggactatccagagcatcgtcttaagttcttctctttgttacgtgcaattggtacc
cattgtttccaagctttaattcaattatcaagtcagcaattgaaacttgtgatggattct
attatttgggcttttcgccataccgaaaggaatattgctgagactggccttaatcttctg
ttggagttgttgaagaattttcaggtttcggagttttgtaaccaattctataggacatat
tttttgacaatcgagcaggagatctttgctgtcttaacagatacattccacaaaccaggc
ttcaagctacatgttttagtgcttcagcatttgttttgcttggttgactctggtgcatta
acggagccactatgggatacttctacagttccatatccatactcaaacaatacaatgttt
gttcgagattacaccataaaactattggggtcatcatttccaaatatgtcagttgctgag
ataactcattttgtcactggattgtttgagtccaaaaatgatcctccaaattttaagaac
catatacgagactttctcgtccaatcgaaagagttctctgctcaggataacaaagatctt
tacgcagaggaagctgctgcccagagagaacaggaacgccagagaatgttgtccattccc
gggctcatcgcccctaatgagcttcaggacgagatgttggattcgtag
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integrated database retrieval system
