KEGG   Zingiber officinale (ginger): 122045501
Entry
122045501         CDS       T08725                                 
Name
(RefSeq) splicing factor 3B subunit 4-like
  KO
K12831  splicing factor 3B subunit 4
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122045501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    122045501
Spliceosome [BR:zof03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122045501
 Complex B
    122045501
 Complex C
   U2 SnRNP specific factors
    122045501
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5
Other DBs
NCBI-GeneID: 122045501
NCBI-ProteinID: XP_042461679
LinkDB
Position
2B:complement(24963548..24977079)
AA seq 363 aa
MTTRITPGVGANLLGQHAAERNQEATTYVGNLDPQVGEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFIEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFEASDAAIESMNGQYLC
NRQITVSYAYKKDTKGERHGTPAERVLAASNPGTQRIRPHTLFASGPPTLPNGALANGPI
PAAIPPRPFMNGSIPAIPVPAVRPPPPPVGQFPPPMQWPAQPQPGQTFPQHVMPPPPFQQ
FRPPANMPPPITGMMRPPPPPFGAGVPPALWRPPPPPHQMAGGPMPPMPMSMPPPQLPNG
SAQ
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgaccactagaatcacccccggagtcggagccaacctcctcggtcagcacgccgcagag
aggaaccaagaggctaccacatatgttggcaaccttgaccctcaggtcggtgaggagtta
ctgtgggaattgtttgtccaagcaggccctgttgttaatgtctatgttccaaaagataga
gttacaaatcttcatcaaggatatggatttattgagtttcggagtgaagaagatgcagat
tatgctataaaaattttgaacatgattaaactttacggaaagccaatacgtgtgaacaag
gcttcccaggacaagaagagtttggatgtaggggcaaacctttttgttggtaatcttgat
ccggatgtagatgagaagcttctctatgatacatttagtgcatttggagttattgtaaca
aatcccaagataatgcgtgatcctgagactggaaactctcgaggatttggttttgttagc
tatgattcttttgaggcatctgatgcagctatagagtcaatgaatggtcagtatctttgt
aatcgtcaaatcactgtttcatatgcttacaagaaagatactaaaggagaacgacatggc
accccagcagagcgagttctggcagctagcaacccaggaactcagaggatcaggccacat
accttgtttgccagcggaccacctacccttcccaatggggctctggcgaatggaccgatt
cctgcagcaatccctcccaggccattcatgaatggctctatccctgccattccagtccca
gcagtacgccccccaccaccaccagttggccaatttcctcctcccatgcagtggcctgct
caaccacaacctggtcaaacctttcctcaacatgtgatgccgccgccaccgtttcaacaa
ttcagacctccggccaacatgccccctccaattacaggtatgatgaggccgccgccacca
ccatttggtgctggggttccacctgctctatggagacctccccctccccctcatcagatg
gctggagggcctatgcctccaatgccgatgtccatgccaccacctcagctgccaaatgga
tctgctcaatga

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