Zingiber officinale (ginger): 122045527
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Entry
122045527 CDS
T08725
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like isoform X1
KO
K03064
26S proteasome regulatory subunit T4
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
122045527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
zof03051
]
122045527
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
122045527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
AAA_2
RuvB_N
AAA_16
Prot_ATP_ID_OB_C
AAA_22
AAA_7
AAA_14
nSTAND3
TIP49
Mg_chelatase
ATPase
RNA_helicase
Parvo_NS1
PRS7_OB
NPHP3_N
AAA_24
Sigma54_activat
AAA_18
AAA_28
AAA_3
DUF815
TsaE
NACHT
ABC_tran
AAA_25
bpMoxR
ATPase_2
IstB_IS21
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
122045527
NCBI-ProteinID:
XP_042461711
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All DBs
Position
2B:complement(27951140..27966326)
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AA seq
413 aa
AA seq
DB search
MSDGGGDAVSRQKAVADYRKRLLCHEDLSSRHTTLRGNLKALKKEITKTKDDLEYLQGAG
QYIGEVLRPLNNERFIVQATCGKRWVVNCCNKVHKGKLTAGTRVALNIDALTIMRCLPGE
VDPVVYNMLHEDPGYVSYSAVGGLSDQIRELRESIELPLMVPELFLRIGIKPPKGVLLYG
PPGTGKTLLARLIASNIDVNFLKVVASAIIDKYIGESARLIRKMFGYARDHQPCIIFIDE
IDAIAGHRLRESTNADREIQRTLMELLNQLDGFDQLGKVKVIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRIEILRIHAAGITKHGDIDYDGVAKLAEGFNAADLRNVCTEAGMSA
ICAERDYVVHEDFMKVKYFSWKNFYAADLRHILFLLYLEPLAHPKLLNIVFFQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggcggaggggatgctgttagtcgtcagaaggcggtggcggactaccggaag
aggctgctatgtcacgaggatctcagttccaggcatacgacgctgaggggaaatttaaaa
gccttaaagaaggagatcactaaaactaaagatgatctagagtatctccagggagcagga
caatatattggagaggttcttaggccacttaataatgagcgatttattgtacaggcaaca
tgtggaaaaaggtgggttgttaactgctgcaacaaagtgcacaaagggaaactaacagca
ggaacacgggtggctcttaatatagatgctcttacaattatgcgctgtcttccaggagag
gttgatcctgttgtgtataacatgctgcatgaagatccaggatatgttagttactctgct
gtaggtggactgtcagaccagataagggaactgagagagtcaattgagctgcctcttatg
gttcctgaactcttcctcagaataggaattaaacctccaaagggggttctcctctatggt
cctcctggtactggaaagacactactggcgagattaattgctagcaacatagatgtgaac
tttctaaaggttgtggcaagtgccataatagacaaatatatcggtgaaagcgcacgtctg
attaggaagatgtttggttatgcacgtgaccatcaaccttgcattattttcatcgatgag
attgatgccattgcggggcatcgtttgagagagagtaccaatgctgatcgggagattcaa
cgaacactaatggaactgctcaatcaactggatggatttgatcaattagggaaggttaaa
gtgattatggcaacaaatcgaccagatgttctagatccagctctacttcgccctggcagg
ctagacagaaaaattgagattcctttaccaaatgaacagtcaaggatagaaattcttaga
atacatgctgctgggataacaaagcatggtgatatcgactatgatggagttgcaaaactt
gcagagggttttaatgcagcagatcttaggaatgtatgcacagaagctggaatgtcagct
atttgtgcagagcgcgactatgtggttcatgaagactttatgaaggtaaaatatttctca
tggaaaaatttctatgcagcagatcttaggcatattttgtttcttctgtacctggagcct
cttgcccatccaaaacttttgaacattgtcttttttcagtaa
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