Zingiber officinale (ginger): 122045761
Help
Entry
122045761 CDS
T08725
Name
(RefSeq) oligouridylate-binding protein 1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122045761
03041 Spliceosome [BR:
zof03041
]
122045761
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122045761
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122045761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_10
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
122045761
NCBI-ProteinID:
XP_042462056
LinkDB
All DBs
Position
2B:66567630..66574698
Genome browser
AA seq
434 aa
AA seq
DB search
MQQQQQQQLRFKQQQQALMQHALLLQQQQQQPQQQSLYPHPGLLAGPQIEPILSGNLPPR
FDPSTCRSVYVGNVHLQVTEPLLQEVFQSTGLVEGCKLIRKEKSSFGFVDYFDRRSAALA
IMTLNGRQLFGQPIKVNWAYASGQREDTSGQYNIFVGDLSPEITDATLFACFSVYPSCSD
ARVMWDQKTGRSRGFGFVSFRNQQDAQGAINDLTGKWLGSRQIRCNWATKGANANEEKQS
SDSKSVLELTNGSTAEDVQENANDDGPENNPQYTTVYVGNLAHEVTQVDLHRYFHALGAG
AIEDVRIQREKGFGFVRYSNHSEAALSIQLGNGRVFCGKPIKCSWGSKPTPPGIASTPLP
PPAAAPFPGLSTADLFGYDRVLALSKLGANQALMQAPGQLPMKQAAMGLGAGASQALYDG
GYQNAGAAQQLMYY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagcagcagcagcagctcaggttcaagcagcagcagcaggccttgatgcag
catgcactcctcctccagcagcagcagcagcagccacagcagcagtcgctctatcctcac
ccgggcctcttggccggccctcagatagagcctatcctaagtggaaatctacctcctaga
tttgacccaagcacatgccggagtgtctatgtaggcaatgttcatcttcaagttactgaa
ccccttcttcaagaagtttttcaaagtactggtttggtcgagggatgtaagcttattagg
aaagagaagtcatcctttggctttgttgattattttgatcgccgttcagctgctcttgca
attatgacacttaatgggaggcagctgtttggtcaacctattaaggttaactgggcgtat
gccagtgggcaaagagaggacacatcagggcagtataacatatttgttggtgatcttagc
cctgagattacagatgctacattgtttgcatgcttctctgtatatccaagctgctcggat
gcaagggtcatgtgggaccaaaaaactggtcgttcaagagggtttggttttgtttctttc
cggaaccaacaggatgctcaaggtgccataaatgacttgactggcaagtggcttggcagt
cggcaaattcgttgtaactgggctacaaagggagctaatgctaatgaggagaaacaaagt
tcagattcaaaaagtgtcctggaactaacaaatggatctactgcagaagatgtacaagaa
aatgcaaatgatgatggcccagagaataacccacaatataccactgtatatgttggtaat
cttgctcatgaggttactcaggttgatctccaccgttatttccatgctttaggtgctgga
gcgattgaagatgtccgcatacaacgtgaaaaagggtttggtttcgtgagatacagtaac
cattctgaagctgctttgtctatccaactgggaaatggccgagttttctgtggaaagcca
attaagtgttcatggggtagcaaaccaactccacctgggatagcctccaccccgctcccc
ccacctgcagctgctccattccctggactttccacagctgacctctttggttatgatcgc
gtccttgcattaagcaagctgggcgcgaaccaggcactgatgcaagctccgggtcagctt
ccaatgaagcaggctgccatgggactgggtgcaggcgcgagccaggctctctacgatggc
gggtaccaaaatgctggcgcagcccagcagctgatgtactactag
DBGET
integrated database retrieval system
