Zingiber officinale (ginger): 122045885
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Entry
122045885 CDS
T08725
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122045885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122045885
Spliceosome [BR:
zof03041
]
Common components
Common spliceosomal components
SR proteins
122045885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SET_assoc
Nup35_RRM_2
RNA_bind
RRM_5
RRM_3
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
122045885
NCBI-ProteinID:
XP_042462226
LinkDB
All DBs
Position
2B:complement(73790040..73794896)
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AA seq
238 aa
AA seq
DB search
MRPVFCGNLDNDTRHSDLDRLFSKYGRVDRIDMKSGYAFVYFDDERDAEDAIHRLDGIPF
GYSRRKLSVEWSRQGERGRERDGSRPAANTKPTRTLFVINFDPIRTRDRDLERHFEPYGT
ITNVRIRRNFAFIQFKTQEEATKALDNTNMSKILDRMVTVEYAFRDDDAGDHDPRDSPRR
GGGGGRHEDRSYGRSDSPVHRRGRPSPDYSRARSPQYDRYDGPSYGRSRSPEYGRSRR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtgttctgtggaaatctcgacaatgatactcgccattcggaccttgaccgg
ctcttctctaagtatggaagggtagatcgcatcgacatgaagtccggatatgcatttgtt
tattttgatgatgaacgggatgcagaagatgccatacacagacttgatggtatacctttt
ggttatagtagacgcaagctgtcagttgagtggtcaaggcaaggagaacgggggcgggaa
cgtgatggttctagaccagcagcaaatacaaagcctacaagaaccttgtttgtcatcaat
tttgatccaattcgtactagagatagagatcttgaaagacatttcgaaccttatgggaca
attactaatgttcgaattagaaggaactttgcatttattcagttcaagactcaggaagaa
gcaaccaaagcccttgacaacaccaacatgagcaagatattggacaggatggtgactgtt
gagtacgcattcagggacgacgacgctggagatcatgacccgcgtgatagcccaagaaga
ggtggtggtggtggtaggcatgaagatagatcctatggacgctcagacagtcctgtacac
cgaaggggccgtccaagccctgactacagtcgagctaggagtcctcaatatgaccggtat
gatggtccctcgtatggcaggagcaggagtcccgagtatggtcgtagtcggaggtga
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integrated database retrieval system
