Zingiber officinale (ginger): 122045930
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Entry
122045930 CDS
T08725
Name
(RefSeq) ABC transporter B family member 28-like
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122045930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122045930
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
122045930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_16
ABC_ATPase
AAA_30
AAA_29
AAA_5
AAA
RsgA_GTPase
AAA_25
AAA_28
AAA_33
AAA_14
AAA_15
Rad17
nSTAND3
nSTAND1
Cytidylate_kin
AAA_23
Motif
Other DBs
NCBI-GeneID:
122045930
NCBI-ProteinID:
XP_042462299
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All DBs
Position
2B:complement(76179816..76188352)
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AA seq
719 aa
AA seq
DB search
MAAPSVALIQSLAASSSSPFRKSRFSAGSSISGRFSSTILFPGSPRLPLRLTSRTVDARR
RSGRGARAAYVSAPSADFESVSKRESSSDDFSPASPAALSWGVIWSLITHHKLRMAAACG
SLIGGTACTLAMPIFSGKFFQILTGSISEPLWRLLSQISFLYALEPIFTIIYVTNMTIIW
EEVMANLRGQIFRQILIQKVEFFDRHKVGELTGLLTSDLGSLKDLVNDNISRDRGLRALS
EVVGTVCILFFLSTQLAPILVLLMVAISGSVAIFKRSTIPAFLSHSMAQANISDCATETF
SAIRTVRSFAGEKRQISIFRNMVLAYQKSGIRLGLLKSANESLTRMVVYISLMALYILGG
SKVKTGKLSVGTMISFIGYTFTLTFAVQGGVNSLGDLRRTFAATERINSILSAAEIDVPL
AYGLEKEFQTNEADVDLSLDNGGLPTKKAQGISNHSMSALRSTSGGCSLARSGDIHLEDI
YFSYPLRPDVEVLNGLDLTLQCGKVTALVGPSGSGKSTVVQLLARFYEPTRGRITVTGED
IRTFDKREWAQVVSVVNQEPVLFSVSIGENIAYGLPDENVSKEDIIKAAKAANAHEFIIL
LPQGYDTLVGERGSLLSGGQRQRIAIARALLKNAPILILDEATSALDTTSERLVQEALDH
LMKGRTSLVIAHRLSTVQNAHQIAVCSGGKIAELGTHMELLAKGGQYSSLVGTQRLAFE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggccgctccttccgtcgctctgatccaatccctcgccgcctcttcctcctcgccattc
cggaaaagtcggttttccgcaggaagctcgatctccggccgcttttccagcacgattcta
ttccccggatcacctcggctgcccctgcgcttaacctcccgcaccgtagacgcgcggagg
aggagcggaagaggcgcacgggcggcatacgtgtccgcgccttccgccgacttcgaatcc
gtgtccaagagagagagctcctccgatgacttctcacccgcatctcctgccgctttgagc
tggggcgtcatctggtctctcatcactcaccacaagctccggatggccgccgcgtgcggt
tctctcattgggggaactgcttgtaccctagcgatgcccatattttctgggaagttcttt
cagatactcacaggcagcatttctgagcctttgtggagacttctctctcagatttcattt
ttatatgctctggaacccatatttactatcatctatgtcaccaacatgaccattatatgg
gaagaggttatggcaaacttaagaggccaaatatttagacagatattgattcaaaaggtt
gagttctttgaccgccataaggttggtgaattgactgggttgttgacatctgatttgggt
tccctgaaggacctagttaatgataatatctcaagggatcgtgggctcagagctctctct
gaggttgtaggtaccgtgtgcatacttttcttcctctctacacaattagctcctatcctt
gtgttgcttatggttgccatatctggttcagtagcaatatttaaacggtcgacaattcct
gctttcttatctcattcaatggcccaagcaaacatatcagactgtgcaactgaaacattt
tctgcaattcgtactgtaagaagctttgctggtgagaaacgacaaatctccattttcaga
aatatggtgcttgcataccagaagagtggaataagacttggtttgttgaagtctgcaaat
gaatccttaacaaggatggtagtctacatttctctaatggcactttatattctcggtgga
agcaaagtgaagacaggcaaactctctgttggaactatgatctcctttataggttatacc
ttcacactaacatttgcggttcaagggggtgttaacagtcttggagatcttcgccggaca
ttcgctgccactgaacgcataaactctatactttctgctgctgaaattgacgtgccactc
gcatatggcttagagaaggaatttcaaacaaatgaagcagatgttgatcttagtttggat
aatggaggacttcctactaagaaagcgcaaggcataagtaatcattccatgtcagcattg
agatctacaagtggcggatgtagccttgctcgttcaggagacatccatctagaagatata
tacttctcttatcctttgaggcctgatgtggaggtcctaaatggtctcgatctgactctc
caatgtggaaaagtaactgccctagtggggcctagtggctctggaaaaagtacagtcgta
caactcctggcacggttttacgagccaacgagagggcgcattactgtgacaggggaagat
atcagaacctttgacaaaagggaatgggctcaggtcgtctcagtagttaatcaggaacct
gttctgttttcagtttccatcggagaaaatattgcttatgggcttcctgatgagaatgtc
tccaaagaggacataataaaggccgccaaagccgccaacgctcacgagttcataatctta
cttcctcagggttatgacacactagttggcgaacgaggaagcctcttaagtggcggacag
agacagagaattgctattgcacgagctcttcttaaaaatgctccaattttgatactcgat
gaggccaccagtgctctggacacaaccagtgaacgcctggtgcaggaggctctcgaccat
ctgatgaagggaaggacatctttggtgatcgcccatcgactaagcaccgtgcaaaatgca
caccaaattgctgtttgttcaggtggtaagatcgcagagctaggaacccatatggaattg
ctagccaagggaggccaatactcctccttagtcggaacacaacggctcgcatttgagtga
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