Zingiber officinale (ginger): 122046098
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Entry
122046098 CDS
T08725
Name
(RefSeq) pumilio homolog 1-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
zof
Zingiber officinale (ginger)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
DUF445
Motif
Other DBs
NCBI-GeneID:
122046098
NCBI-ProteinID:
XP_042462560
LinkDB
All DBs
Position
2B:complement(84224630..84232646)
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AA seq
1042 aa
AA seq
DB search
MLSNMGVRSLIGSGGDGFGGEDFEELGLLLREQRRQEASDRESELSIFRSGSAPPTVNGS
LAAVGGIYGREGAFGVPDISSVKNGDEISSEEELLSNPAYVSYYYSNANMNPRLPPPVLS
KEDWRSTQRLQSSSLIGGTADRRKINGGEEGDDISLFSKQPIFTSMEEQQAETIMEPGAG
EWVDRGDGLIGLSLGRQKSFADVVQDEVVQSGPSSSHPSRAASRSAFSGSEPLSSPSTQI
SSHKVSALMDEENIRFLHSDNGHEKTGTSLPHSYAYVVGSSLKRSTTDAQSVARAQSPCI
PHLGLRICAPDKKTHDFSSSNGISLDTVESDDLMASLSGINLSSAGENTTKSKIQQGIYD
NQNFPFASHLGQNNVDKQLTLKSSDPEYLGMQAIPKSAKPPYPGSIRNSVGSVDLRTSGS
GLNGLIESQKSPAKSDKSYLEAPSHYITTNGVSSLYESVNAAFSSSNLNAYLENPALSAS
LINHVGLGSLSPMLESVASVSPNASPKMEVGALQGGTFSPPNLVGPADIRTLSRNGNSVS
TAAALQAPLNDPLYIDYLMAAEYTAQLGANCSNPSLEKGYLSSYADLLGIQETYLESLLQ
QQKPYGMTHLAKSASLIHNYYGNSGFALATSYPGSPLANSIASPVGPGIPLSLRERNMHY
SSNWRNISRGVLGSWHSEANGNIDGQFPSSLLDEFKSNKTRSFELAEIAGHVVEFSADQY
GSRFIQQKLETATTEEKNMVFVEIMPHALSLMTDVFGNYVVQKFFEHGSSAQRRELANHL
NGHVLALSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGRIIHCVRDQNGNHVIQKCIECV
PQDAIQFIISTFYNQVVTLSTHPYGCRVIQRVLEHCDNPNTQQIVMDEILHSVSMLAQDQ
YGNYVVQHVLEHGKPDERSVIIKQLTGQIVQMSQQKFASNVIEKCLTFGSLEARQLLVSE
MLGSTDENEPLQAMMKDQFGNYVVQKVLETCDDQQRELILSRIKVHLNALKKYTYGKHIV
ARVEKLVAAGERRIGLQASFPS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctaatatgggagttcgttctttgatcgggagcggaggggatggttttggcggc
gaagattttgaggagctgggtttgctgctcagggagcagaggaggcaagaggcgagtgat
cgagaaagtgagctcagcattttccggagcggatccgctccgcccactgtcaatggttcg
ctcgccgcagtgggagggatctatgggcgcgaaggtgcattcggcgtgcctgatatttcc
tcagtaaagaatggggacgagatttcgtcagaggaggaactcctctccaatccagcatat
gtctcctactactactcgaatgcaaatatgaacccccggctaccgcccccggtgctctcc
aaggaggactggcgatcaacacagaggctccaatccagctctttgataggagggactgct
gatagaaggaaaatcaatggaggggaggaaggggatgatatatcactcttctctaaacaa
ccaatttttacttcgatggaggagcaacaggcagagacaattatggaacctggggcagga
gaatgggttgatagaggagatggcttgattggtctgtcacttggccgccagaagagcttt
gctgatgttgtgcaggatgaagttgtacaaagtggtcccagttcaagccatccctcacgt
gctgcaagtcgtagtgcttttagtggttctgaaccattatcttctcctagcacccagatt
tcatcacataaagtaagtgcattgatggatgaagaaaacatcagatttctacatagtgac
aatggacatgagaaaactggtacatcattgcctcacagttatgcatatgttgtcggctcc
tctttgaagcgaagtactactgatgcccagtcagttgcaagagctcagagtccctgcatt
ccacatttaggcctgagaatctgtgcccctgacaaaaaaactcatgatttctcctcctcg
aatggtatctcattggacacagttgaatctgatgatcttatggcttccttatcaggtatt
aacctgtcatctgctggtgaaaatactacaaaatcaaagattcagcaaggaatatatgat
aaccagaactttccttttgcttcacatttaggccagaacaatgttgacaaacagcttacc
ctcaaaagttctgatccagaatatctaggcatgcaggccattcctaagtcggcaaaacct
ccttaccctggctccattagaaattcagtaggttcagtggatttgagaacttcaggatca
ggtttgaatgggctaattgaatctcaaaagtctcctgctaaatctgacaagtcatatctt
gaagcaccttctcattacatcactacaaatggtgtttcttctctgtacgagagtgtcaat
gcagccttttcaagttccaatctcaatgcgtatttagaaaatccagcattatcagcaagt
ttgataaatcacgttggcttggggtctttgtctccaatgttggaaagtgttgctagtgta
tcaccaaatgcatcacctaaaatggaggtaggggcattacaaggtggaactttctcacca
ccaaatttagttggacctgcagacatacgaactctcagtagaaatggaaattcagtttcc
actgcagcagctcttcaggcaccacttaatgacccactttatatcgactacttgatggca
gctgaatatactgctcaacttggagccaactgttctaatccatccctggagaaaggttat
ctaagttcttatgctgatttacttgggatccaggaaacttacttggagtccttacttcaa
caacagaagccgtatggcatgacacatctggctaaatctgcttctctaattcataattat
tatgggaattcaggatttgccctggctacttcatatccaggaagtcctttagcaaattct
attgcttctcctgttggacctggcatccctcttagtctcagagagcgcaatatgcattat
tcttccaactggcgaaacataagtagaggtgttctgggatcttggcattctgaggctaat
ggtaacatagatggacagtttccatcctcactcttggatgaattcaagagcaataagact
agaagctttgagcttgctgagattgcaggccatgtggttgagttcagtgctgatcaatat
ggaagccgcttcatacagcagaaacttgaaacagctactactgaagaaaaaaacatggtt
tttgttgagataatgcctcatgctttgtctctgatgactgatgtatttgggaattatgtg
gtccagaagttttttgaacatggatcatcagctcagagacgggaattagctaaccacctt
aatgggcatgtattggctctcagcctccagatgtatggttgtcgagtgatccagaaggca
atagaagtagttgacttggaccagaagataaagatggttcaagagcttgatgggcgtatc
atccactgtgtgcgagatcaaaatgggaaccatgtcattcaaaagtgtattgagtgtgtc
ccacaagatgcaattcagtttatcatctcaacattctataatcaagttgtgacactatct
actcatccatatggttgtcgtgttatacagagagtgctggagcattgtgacaatcctaat
actcaacagattgtcatggatgagattttacattctgtttccatgttggcacaagaccaa
tatggtaattatgttgttcagcatgtgctggagcatggaaagcctgatgagcgttctgtg
attattaagcaattaactggacaaatagtacagatgagtcagcagaaatttgcttcaaat
gtcattgaaaaatgcttgactttcggtagtcttgaagcacgacaacttttggtgagcgag
atgttgggttcgactgatgaaaatgagcctctccaggccatgatgaaagatcaatttggt
aactacgttgtacagaaagtgttagagacgtgcgacgatcagcagcgggagctgatcctc
tcgcgaatcaaggtccacttgaacgcgcttaaaaaatacacttacgggaagcatattgtt
gctcgtgttgagaagcttgttgccgccggagagaggaggatcgggctccaggcgtccttt
ccctcgtaa
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integrated database retrieval system
