KEGG   Zingiber officinale (ginger): 122046100
Entry
122046100         CDS       T08725                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    122046100
   03400 DNA repair and recombination proteins [BR:zof03400]
    122046100
Enzymes [BR:zof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122046100
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122046100
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122046100
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-RING_5 zf-RING_2 zf-C3HC4_3 Rad50_zn_hook zf-C3HC4_2 zf-C3HC4 ResIII DEAD Prok-RING_4 zf-rbx1 zf-RING_UBOX zf-ANAPC11 SWI2_SNF2
Other DBs
NCBI-GeneID: 122046100
NCBI-ProteinID: XP_042462565
LinkDB
Position
2B:83563104..83567951
AA seq 858 aa
MASMDELEPPSGTSDLESQELLSDAVLVGFVLADIVGLRHYSGVIRGREMVGLVREPLNP
YDPNAIKVLNTRTVQVGHIRRGSAAALAPLIDSHLVTVEAIVPKPPSKNRNPYRLPCQIH
LFARPDAIPIVRAAVSEGGLELIEYGDHQFGLSEAVIIQEESSKKSKSGKGSKSVDEIFA
LVRKVDEGKFAPLEPPKDIILSELFEHQKEGLGWLVGRENSSDLPPFWEARNGTFVNVLT
NHETSERPETLKGGIFADDMGLGKTLTLLSLIAIDKCGGFPSSSSSSLQEEHERLRSSSS
RKSGKKTTAPRKRRKLDGGSVTQTEDALRPKTTLVVCPPSVFTSWITQLEEHTMPGSLKV
YLYHGDRTQDPAVLLQHDIVMTTYATLSAEFNDSNSPMKEIEWYRVILDEAHLIKNSAAK
QTKAVIALKSERRWAVTGTPIQNSSFDLFSLMAFLKFQPFAIKSYWQNLIERPLYQRKKS
GIARLQALIGTISLRRTKYAEDGSGGVVGLPRKTIVTCYVNLSAEELEFYDHIESEAQNT
LREYLDTDTLLRNYSTVLHILLRLRQICNDMELCPSDIQSFLPPSALEDVSQNPELLKKL
ASLVDEGDDFDCPVCLSPPQRIVITCCAHIFCQACILKTLKQVNACCPICRHSLSKTDLF
VAPQTKSFNDDMSKAHSRNRPLSSKVTTLLKLLLADKEQNPSTKSVIFSQFRKMLILLQE
PLKEAGFVVLQLDGSMSTKKRTEVIKKFTASGPGTPMILLASLKAAGAGINLAAASRVYL
FEPWWNPAVEEQAMDRVHRIGQREEVKVVRMIVKDSIEERILMLQEKKKSLASGAFGKKS
TNDQQRMRIEDLRIMMHI
NT seq 2577 nt   +upstreamnt  +downstreamnt
atggcctccatggacgagctcgagcccccgagcggcacctccgatttagagtcgcaagag
cttctctccgatgcggttctcgtcggcttcgtcctcgctgacatcgtcggcctccgccac
tactccggcgtcatcagaggccgggagatggtcggcctcgtccgcgagcccctcaaccct
tacgatcctaatgctatcaaggtcctcaacactcgcactgtccaggttggccacatccgg
cgtggctccgccgccgccctcgcgccgctcatcgactcgcacctcgtcaccgtagaggcc
attgtgccaaaacccccttccaagaatcggaatccctaccgcctcccctgccaaatccac
ctctttgcccgccccgacgcgattccgattgtccgcgccgccgtctccgagggagggctt
gagctcatcgagtacggcgaccatcagttcggtctttcggaggccgtcatcatacaggaa
gagagttctaagaagtccaagtcagggaagggcagcaagagcgtcgacgagatctttgcc
ctagttagaaaggtcgatgaggggaaatttgctcctttggagcctcctaaagacattatt
ttgtcagagctgttcgagcaccagaaagaagggttagggtggttggttgggagggagaat
tcgtctgacctgcctccattttgggaagcacggaatggaacttttgtgaatgtgttgacg
aatcacgagacctcagagaggccagagacgctgaaaggtgggatcttcgccgacgatatg
ggtttaggaaagactcttactctactttctttgattgccatcgacaagtgtggtggcttt
cccagttcctcctcatcaagtcttcaggaagaacatgaaaggctaagatcttcgagtagt
agaaagtctgggaagaaaactactgctccacggaaaagacgcaaacttgatggtggaagt
gtcacacagactgaagatgccttgcgacctaaaacgacattggttgtttgtcctccttct
gttttcacatcatggataactcaattggaagaacacaccatgcctgggagcttgaaagtg
tatttgtatcatggagatcgcacacaggatcccgcggtgcttttgcaacatgacattgtt
atgacaacctatgccactttgtctgctgagttcaatgattctaactctcctatgaaggaa
attgagtggtacagagttattcttgatgaagctcacttgattaaaaattctgcggctaag
caaacaaaggcagtcattgctctgaaatctgagagaaggtgggcagtgacagggacacct
attcagaatagttcttttgatttgttttcgcttatggctttcttgaaatttcaaccattt
gcaatcaagagctactggcagaacttgattgaacgcccactttatcaaaggaaaaagagc
gggatagctcgcctacaggccttgataggaacaatatccttgcggaggacaaaatatgca
gaagatggaagtggtggtgtggttgggcttccacgcaaaactattgtaacctgttatgta
aacctatctgccgaggaactagaattttatgaccatattgaatctgaagctcaaaacact
ctcagagagtaccttgatacagacactttactgcgtaattattcgactgtgcttcatata
ttactaagactaaggcagatttgcaacgacatggagttgtgtccttcagacatccaatct
ttccttccacccagtgcccttgaagatgtttctcagaacccagagttgcttaagaaatta
gcatccttggttgatgaaggagatgatttcgattgtccagtttgcctttctccacctcag
aggattgtcattacttgttgtgctcacatattttgtcaagcctgcatactgaaaacccta
aaacaggtcaatgcctgttgtcccatctgtcgtcattccttatcgaaaactgaccttttt
gtggcgccgcaaacaaaatccttcaatgacgacatgtcaaaagctcactcaagaaatagg
ccattatcttcaaaagtcactaccttgttgaaacttctattagcagacaaggagcagaat
ccctcgacaaaatctgtcatcttctcacagttcaggaagatgcttattttgcttcaagag
ccacttaaggaagccggttttgtggttttgcaattggatggttcgatgagcacaaaaaag
aggactgaggtgataaagaaattcacagcatctggtcctggaacaccaatgattctactc
gccagtctaaaggctgcaggtgctggaataaacctcgcagcggcatcccgagtctacctt
ttcgagccatggtggaatcctgcagtcgaggagcaagcgatggacagagtgcatagaatt
gggcaacgtgaagaagtgaaggtcgtgaggatgatagtgaaggacagcatcgaggagagg
attctgatgttgcaggaaaagaagaagagcttagcgagtggtgcttttgggaagaaatca
acaaatgatcaacagcgaatgcgcattgaagatttacgcattatgatgcacatctaa

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