Zingiber officinale (ginger): 122046132
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Entry
122046132 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122046132
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122046132
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122046132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
DUF6274
Motif
Other DBs
NCBI-GeneID:
122046132
NCBI-ProteinID:
XP_042462611
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All DBs
Position
2B:84117770..84120836
Genome browser
AA seq
185 aa
AA seq
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MESPPEDDVCSICHDWFTLPCQANCSHWFCGNCILRVWHHGSALQPCKCPICRRFITLLI
PTDAAAQERQDTEASQILENIEKYNRNFGGGSSSLIQRLRDLPFFMRRLLRELMDPQRSL
PLVFRARMIFAMVMSAIYVLSPVDIIPEGIFGLVGLLDDLIILLIVLLHVATIYRSVLLY
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgccgccagaggacgacgtctgctcgatctgtcacgattggttcaccctccct
tgccaagccaattgctcccattggttctgcggaaattgtattttgcgtgtctggcatcat
gggtccgcccttcaaccatgcaagtgccccatttgccgtcgcttcataactttgcttata
cccaccgatgctgctgcacaagaaaggcaagatacagaagctagtcaaattcttgaaaac
atagagaaatataaccgaaattttggtggaggctcatccagccttatacagaggttaaga
gatctgccattcttcatgcgaaggctgttaagagagttgatggatccacagaggtcactg
cctcttgtattcagggcacgaatgatttttgctatggtgatgagtgcaatatatgtgctg
agtccggttgatattatcccagaaggtatatttggattggtcggtctgctagacgatctc
atcattctcctgattgttctcctccacgttgctaccatataccgctcggtgcttctttat
cgtcatggtggttcctga
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