Zingiber officinale (ginger): 122046157
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Entry
122046157 CDS
T08725
Name
(RefSeq) tubulin alpha-5 chain-like
KO
K07374
tubulin alpha
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04145
Phagosome
zof04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122046157
09142 Cell motility
04814 Motor proteins
122046157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122046157
03036 Chromosome and associated proteins [BR:
zof03036
]
122046157
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122046157
04147 Exosome [BR:
zof04147
]
122046157
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122046157
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
122046157
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
122046157
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122046157
Exosomal proteins of other body fluids (saliva and urine)
122046157
Exosomal proteins of colorectal cancer cells
122046157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
122046157
NCBI-ProteinID:
XP_042462644
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All DBs
Position
1B:1275068..1278360
Genome browser
AA seq
449 aa
AA seq
DB search
MREIISVHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGDATDAFNTFFSETSAGK
HVPRAIFVDLEPTVIDEVRTGAYRHLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRALDIERPTYTNLNRLISQVISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFDPSN
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQAP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGGEEDEEPEDY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatcataagcgtccacattggtcaggccggcatccaggtcggcaactcttgc
tgggagctctactgcctcgagcacggcatccagcctgatggcatgatgccgagtgatact
tcagtgggagatgcaacagatgcatttaataccttcttcagtgagaccagtgctgggaag
catgtcccaagggccatctttgtagatctggagcctacagtgattgatgaagtgaggacc
ggagcttatcgtcatctcttccacccagagcaactcatctctgggaaggaggatgctgca
aataactttgctcgggggcactacacagttggcaaggaaattgttgatctctgccttgac
cgagttaggaaattagcagataattgcactggtttgcaaggatttttggttttcaatgct
gttggtggtggaactggatctggtttgggttctttgctgctagagcgtttgtcggtggac
tatgggaagaagtcaaagcttggtttcaccatttatccttctcctcaggtttcaacagca
gttgtggagccatataacagtgtgctttctactcactccttgcttgaacacactgatgtt
gcagttctgctagacaatgaagcaatttatgatatctgcaggagagctctagatattgag
aggccaacttacaccaacttgaaccggttgatatctcaggtcatatcctctttaactact
tctctgaggttcgacggagctattaatgtggatattaccgagttccagaccaacctagtg
ccctatcctagaatccactttatgctctcttcctatgcgcctgttatctctgctgaaaaa
gcataccacgagcaactctctgtccctgaaattacaaatgcagtgtttgacccatcaaac
atgatggcaaaatgtgaccccaggcatggcaaatacatggcttgttgtttgatgtaccga
ggtgatgtcgtgcccaaggatgtgaatgccgctgtcgcaaccatcaagacgaagagaact
gtccaatttgtcgactggtgccctactggattcaagtgtggaatcaactatcaggcacca
actgtggttcctggaggtgacttagctaaagtgcagcgcgctgtatgcatgatcagcaac
aacactgctgtggctgaggtgttctcaaggattgatcacaagttcgacctgatgtactcc
aagcgtgcgttcgtccattggtacgtaggcgaaggcatggaagaaggagagttctctgag
gcccgggaggatttggctgcacttgagaaggactatgaggaggttggtgcagagggtgga
gaggaggacgaggagccagaagactactga
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