Zingiber officinale (ginger): 122046431
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Entry
122046431 CDS
T08725
Name
(RefSeq) double-strand break repair protein MRE11-like isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03440
Homologous recombination
zof03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122046431
03450 Non-homologous end-joining
122046431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
122046431
03400 DNA repair and recombination proteins [BR:
zof03400
]
122046431
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122046431
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122046431
BRCA1-C complex
122046431
NHEJ (non-homologous end-joining)
MRX complex
122046431
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
DUF8653
PspAA
Motif
Other DBs
NCBI-GeneID:
122046431
NCBI-ProteinID:
XP_042463057
LinkDB
All DBs
Position
2B:95461006..95493475
Genome browser
AA seq
705 aa
AA seq
DB search
MFRVDANNSLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIAEKNQVDFLLLGGDLFH
ENKPSRSTLVKTIEILRRYCLNDRPVQFQVVSDQTVNFQNIFGHVNYEDPHFNVGLPVFT
IHGNHDDPAGVDNLSAIDILSASNLVNYFGKMVLGGSGVGEITIYPILIRKGITSIALYG
LGNIRDERLNRMFQTPHAVQWIRPEAQEGFPISDWFNILVLHQNRVKANPKNAINEHFLP
RFLDFVVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIDGEAKPKHVLLLEIKGSQYR
PTKIPLKSVRPFEYAEVVLKDEDGIDPNDQASVLEHLDKVVRDLIDRSTKSAISRLELKL
PLVRIKVDYSGFSTINPQRFGQKYVGKVANPQDILIFSKTAKKRQSTEEKIDESERLRPE
ELNQQNIEALVAESNLKMEILAVNDLDIALHDFVNKDDKLAFYSCLRNNLEETRNKLTAE
ADTSKIDDDDLIVKVGMCMQERAKERSLRQKDNMTITTGSHNFQDPRRKNATIPTSANSF
SDEEETRQMLSISKSSQGRGGSTRRGRGRGSGRLKQMSLDETMKTRLSTRSASASMSVAT
RNIVDEGIDSPSSEETERHEMNEIVESSEPEETNKGKGRKRAAPRGRGRDSASSSKRGRK
PDFSSIHNMFMNKDDDDDDEDDISNRLKRVQPRATKNYGAIRKRP
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttcagggttgacgctaataacagtctcagagtgcttgttgcaactgattgtcatctt
ggttatatggagaaagatgaaattcgtagagttgactcctttcaggcttttgaggagatt
tgttctatcgccgagaaaaaccaggttgatttcctcctccttggcggtgatttgtttcat
gagaataaaccttcaagatctactttggtcaagacaattgaaattttgaggaggtactgt
ctcaatgaccgtccagtgcagttccaagttgtcagtgaccagacagtgaacttccagaat
atctttggtcatgtcaactatgaagatcctcatttcaatgttgggttgccagtattcact
atccatgggaatcatgatgatcctgctggagtggataacctttctgccattgatatcctc
tctgctagcaatcttgtgaactattttggtaaaatggtcctaggcggttctggtgttggt
gaaataacaatttatcctatactcattagaaagggtatcacttcaattgccttgtatggt
cttggaaatattcgcgatgaacgactcaacagaatgtttcagacgccacacgccgtgcag
tggataaggccggaagcccaagaaggttttcctatatcagattggtttaacatactggtt
cttcatcaaaatagagtcaaggcaaatcctaagaatgcgataaatgaacatttcttgccg
cgctttttggattttgttgtgtgggggcatgagcatgaatgccttgtggatcctcaggag
gtaccaggaatggggttccatattactcaaccagggtcatctgttgcaacatcattgatc
gatggagaagcaaaaccgaaacatgtacttctcttggagattaagggaagtcagtataga
cccacaaaaatacctttgaaatcagtcaggccctttgagtatgctgaggttgtccttaaa
gatgaggatggaattgatcccaatgatcaagcatctgtccttgaacatctggacaaagtg
gtcagagacctgattgacagaagtacaaaatcagccataagtagattggagctcaagtta
cctttggtgagaattaaggttgattactctggattttcaacaattaatcctcagagattt
ggccagaaatacgttggaaaggttgctaatcctcaagacattctcatattctccaaaact
gcaaagaaacgccaatccactgaagaaaagattgacgagtccgaaagacttcgtccagaa
gaactaaatcaacaaaacattgaggctctagttgctgagagtaatttgaaaatggagata
ctcgcagtcaatgatttggacattgcattgcacgactttgtaaacaaagatgacaaattg
gccttttactcgtgcttgaggaataatctcgaggaaacaaggaacaaactgactgctgaa
gctgatacatcaaaaattgatgatgatgacctaatagtcaaagtgggaatgtgcatgcag
gaacgcgcgaaagagaggtcacttcgtcagaaggacaatatgacaataacaacgggctca
cacaactttcaggatcccagaaggaaaaatgcaactatccctactagtgctaattctttt
agtgatgaagaggagacaaggcagatgctctccatttcaaagtcttcccaaggaagagga
gggtctacaaggagaggaaggggaaggggttctggtagactaaagcagatgtcactagat
gaaactatgaaaacccgcctatctacgagatcagcgtcagcctccatgtctgtggctact
agaaatattgtggatgaaggaatcgactccccttcaagcgaggaaacagaaagacatgaa
atgaatgaaattgtggagagttctgaacctgaagaaactaataaaggaaaaggtcggaaa
agagctgctcctagaggaaggggtagggattccgcatcatcttcaaagagagggaggaaa
ccagactttagttccatccacaacatgttcatgaacaaggatgacgatgacgatgacgag
gatgacatctcaaacagacttaagagggttcaaccacgggcaaccaagaactacggtgct
attaggaagagaccatga
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