Zingiber officinale (ginger): 122046472
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Entry
122046472 CDS
T08725
Name
(RefSeq) ruvB-like 2
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122046472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122046472
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zof03037
]
122046472
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122046472
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
122046472
Chromatin remodeling factors
SRCAP complex
122046472
INO80 complex
122046472
INO80 complex (yeast)
122046472
SWR1 complex
122046472
ASTRA complex
122046472
Cilium and associated proteins [BR:
zof03037
]
Motile cilia and associated proteins
Dynein assembly factors
122046472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
RuvB_N
AAA_22
AAA_19
AAA_5
AAA_16
CBFD_NFYB_HMF
Mg_chelatase
AAA_25
TsaE
Zeta_toxin
AAA_18
ATPase
AAA_17
Sigma54_activat
bpMoxR
nSTAND3
Cdc6_lid
AAA_7
SLFN-g3_helicase
NACHT
MS_channel_2nd
AAA_28
TiaS_TCKD
GvpD_P-loop
KTI12
Motif
Other DBs
NCBI-GeneID:
122046472
NCBI-ProteinID:
XP_042463121
LinkDB
All DBs
Position
2B:97828819..97835355
Genome browser
AA seq
467 aa
AA seq
DB search
MAELRNLSEARDLTRIERIGAHSHIRGLGLDAALEARDVSEGMVGQRAARKAAGLILNLI
KEGKIAGRAILLAGQPGTGKTAVAMGLAKSLGAETPFASVSASEIFSLEMSKTEALTQAF
RKAIGVRIKEEAEIIEGEVVEISIDRPASGASSGQSSSKTGKLTLKTTDMETVYELGGKM
IEALRKEKVQSGDVITLDRASGKVTKLGRSITRSRDYDATGPSTKFVRCPEGELQKRKEV
VHCVNLHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDSKVSEWKEEGKAEIIPGVLFV
DEVHMLDIECFSFLNNALENEMAPILVIATNRGITTIRGTNYRSPHGIPADFLDRLLIIT
TQPYTEEEIGKILEIRCDEEEVDMSKDAKLLLTKIGVETSLRYAIHLITAAALACQKRKG
KTVEMEDVSRVYGLFLDVKRSTQYLMEYQNQYMFNEVPRVGEEEAME
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctcaggaatctttccgaggcacgggatttgacgcgtatcgagcgcatcggg
gcacactcccatatccgagggctcggccttgacgccgcgctcgaggcccgggatgtctcc
gaaggcatggtaggccaacgcgccgcccgtaaggccgctggactcatcctcaacctcatt
aaggaaggaaagatcgctggtcgcgccatcctcctcgccggccaacctggcaccgggaag
accgctgttgccatgggcctcgccaaatccctcggggcggagacaccctttgcgtccgtc
tctgcttccgagattttctctctcgagatgtctaagaccgaggcccttactcaggccttc
cgtaaggccattggcgtccgcatcaaggaggaggcagagatcattgagggtgaggttgtc
gagatttccatcgaccgccctgcatctggagcatcatctggccagtcctcttcgaaaact
gggaaattgactctgaagacgaccgacatggagacagtttatgaactcggagggaagatg
atagaggcgcttagaaaggagaaggtgcagagtggagacgtgataaccctggatagggcc
tctgggaaggtcacaaagcttggccggtcaattacacgatcgagggactatgatgccacc
ggccctagcactaagtttgtgaggtgcccagaaggagagctgcagaagaggaaagaggtt
gtgcattgtgtcaacctccatgagattgatgttatcaatagcagaacacagggttttctt
gcactttttactggtgacactggtgagatccgagctgaagtgagggaacaaatagactcg
aaggtttcagagtggaaagaggaaggaaaggctgagattattccaggtgtcctattcgtt
gatgaggtccatatgctagacattgaatgcttttccttcctaaataatgccttggagaat
gagatggctccaattttagtgatcgcaacaaatcgtgggatcacaacaatccgaggaacc
aactatcggtcacctcatggaattccagctgatttcttggatcgccttctcattataacc
acccagccatacactgaggaagaaatcggtaagattcttgaaatcaggtgtgacgaagaa
gaggtggacatgtccaaggacgcaaagctcttgctgacgaaaattggtgtggagacatca
ctgaggtacgccattcacctaatcaccgcggctgcactggcttgccagaagcgaaagggt
aaaacagtggagatggaagacgtaagcagggtttacgggctgtttcttgatgtgaagaga
tctacgcagtacctaatggagtatcagaaccagtatatgttcaatgaagtacccagggta
ggtgaagaagaggctatggaataa
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