Zingiber officinale (ginger): 122046516
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Entry
122046516 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122046516 isoform X1
KO
K17925
sorting nexin-13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zof04990
]
122046516
Domain-containing proteins not elsewhere classified [BR:
zof04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122046516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
122046516
NCBI-ProteinID:
XP_042463181
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All DBs
Position
2B:complement(101159539..101169181)
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AA seq
1126 aa
AA seq
DB search
MSSGMQTMRGLVDEAKNRVVLLLICVFGLSYLMSLTSSSVWVNLPAAAVVIIFSLYLSHE
LDIRRKPTPNKISIVSKSPQSIPVELLKFPIGKSDWRKKVNSPIVEVAIEQFTRHLVSEW
VIDLWYSRITPDRDGPEELVEIITRVIGEISCRARDVNLIDLLTRDVVNLLRDHLELYRY
SQSKIGRQENKNMPFDQRDIQIKLVLAAGNKLHPALFSAEAEHKVLQNLVRGIMFVLFKP
EDLNCLYFRHTVRELLACTVIRPVLNLVNPRFINERIESLVLSRANNINKKFAPSAEEAP
IIMRRAHSVPSDDQTSCSLDHSSPGLELVQLKNDNQKTGPHESGIINGMHYTGKENESGS
KFGLIVTPRNHNDLPVSLDFVLDKAKDSWSKDTLLLNSQGMDEKKPGAYASEWAQMLDIL
SRRKTQALAPEHLDDLWAKGRNYKKKEASKLGKSVAQSSSITHSEPIESKIYIRDISKKF
PTSSQLENLPETDCNDSNHSDPSFEERIENTNHEETKSESLSSYTTDDESSSVTGLGSPG
TKVWESKNKKDSVSSSIRHPLEATETHGAKRSGKVHIHHRRTSRTLSVRKRSRSSNQKAP
LWQEVARTSFLLADGHDILKDSKNDTRTLELTDNSDTEARGRINNGATALSSVSTESSHS
SMKSHDILVLADTFLKLRCEVLGANIVKSGSGTFAVYSISVTDANNNSWFIKRRYRHFEE
LHRHLKEFPEYNLHLPPKHFLSSGLDLPVVQERCKLLDIYLKKLLQIPSISESIDVWDFL
SIDSQTYIFTDSLSVIQTLSVNLDDKPHEKSAKRFESIENIGSQFSSAEKNFDSEIKDSS
KVMTGSYSESDGLRMRKSHMEQIPGLNSRDQNNPYHDNSENDYESRLRNNTSYSGNSNQV
KNVSIAEVENLQESSKVVDTGGALNIPTECVPPNLSVPILNLVDVIFQLKDGGWIRRQAF
WIAKQLLQLGMGDAFDDWLIEKIQLLRTGVVIASAIKRVEQVLWPDGIFITKHPKRKATA
PISTPGTQSNLKSNPLTYEQQVEADRRAKFVYELIYLFSTEKAPPALVGLVGRKEYEQCA
QDIFFFLQSPFCLKHFAFELLELLLLSTFPELSEVVRECHEEKVSI
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggggatgcaaacgatgcgcggcttggtggacgaggccaagaatcgggtcgtc
ttgctgctcatatgtgtttttggcctctcctatctcatgtccttaaccagctcttcagtt
tgggttaacttgccagctgctgctgttgtgatcattttttctctttatttatcacatgaa
cttgatatccgaagaaagcctacaccgaataaaatttcaattgtcagcaaatctcctcaa
agcatacctgtcgaactactcaagtttccaattgggaaatcagactggagaaagaaggtg
aattcacccatagttgaagtagcaatagagcaattcacaagacacctagtttcagagtgg
gtgattgatctttggtactcacgtataacacctgacagagatggtccagaagaattagtt
gaaatcatcactagggtcattggagaaatttcttgccgggcaagagatgtaaatcttatt
gatcttttgaccagggatgttgtcaatctacttcgtgaccatttggagctttaccgttat
agccagtctaagattgggaggcaggaaaataagaatatgccatttgaccaacgagatata
caaattaaattagttctagctgctggcaataaattacatccagcattattctctgcagaa
gctgagcacaaggttttgcagaatttggttcgtggaattatgtttgtacttttcaagcca
gaagatttaaattgcttatactttcgccacacagttagagagcttcttgcttgtactgtg
attaggccagttttgaacctagttaatccaaggttcataaatgaaaggatcgagtctttg
gttttatctcgtgccaataatattaataagaaatttgcaccatcagctgaagaagcacca
ataatcatgcggagagcacattcagtaccttcggatgatcaaacttcatgttcactggat
cactcaagtccgggtcttgaacttgtacaattaaaaaatgacaatcagaagactggtcca
catgagagtggcataattaatggaatgcattacactgggaaggaaaatgaatctgggtct
aagtttggtttgattgtcacaccaaggaatcataatgatcttcctgtttctttagacttt
gtcctcgacaaagctaaggattcttggtcaaaagacactttgctattgaattctcaaggt
atggatgagaagaaacctggtgcatatgcaagtgagtgggcacagatgttggacattctt
tcaagaagaaagacacaagctcttgcaccagaacatttggatgatctttgggcaaaagga
cgaaactataaaaagaaagaagcaagtaaattaggaaaatcagtggcacaaagttcatct
atcactcattctgagccaattgaaagcaaaatatacattcgggacatatccaagaaattc
cccacttcctcccagctggaaaatttgcctgagacagattgtaatgactctaaccattca
gatccatcatttgaagaaagaatagaaaatacaaaccatgaagagactaaatcagaaagt
ttaagttcctatacaactgatgatgaaagcagtagtgtgacaggtcttggttctccaggt
acaaaagtatgggaaagcaaaaacaagaaggattctgtttcttcaagtatacggcatcct
cttgaagcaactgaaactcatggagcaaagagaagtggtaaagttcatattcatcatcgt
cggacatcaagaacattgtcagtaagaaaaagatctaggtcaagcaatcaaaaggcccca
ctgtggcaggaggttgcaagaacatcatttttgttggctgatgggcatgacatactcaag
gactcaaaaaatgatactagaacacttgaattaactgacaactcagacacagaagctagg
ggtagaatcaataatggggctacagctttgtcttctgtttcaactgagtcttctcattcg
tctatgaagtctcatgatatccttgttttggccgatacatttttgaagttgagatgtgag
gtactaggtgccaatattgtaaaaagtggttcaggaacatttgctgtctattccatttcg
gtgactgatgcaaataacaatagttggttcattaaaagaaggtaccgccattttgaggag
ctacatcgacatctaaaagagtttccagagtataacttacatttgccacccaagcatttt
ctatcatctgggctggatcttcctgtggtccaggaaagatgtaaacttcttgacatatat
ttgaagaagttacttcaaattccaagcatatcagagtctattgatgtttgggatttcctc
agtattgattcacagacttacatttttacagattctctctccgtcattcaaactttatca
gttaatcttgatgataagccacatgaaaagagtgcaaagaggtttgaatcaattgaaaat
attggtagtcagttctcttctgctgagaaaaattttgattctgagatcaaagacagttct
aaagtaatgactggtagttattctgaatctgatggtttaagaatgagaaaatcacatatg
gagcaaattcctggtcttaatagcagagaccagaacaatccatatcatgacaattcagaa
aatgattatgaaagcagactcagaaataatacttcatattctggtaactctaaccaggta
aaaaatgtctcaatagctgaagttgaaaatttgcaagagagctctaaagttgtagatact
ggtggggcactgaacattcctactgaatgtgtaccgccaaatttgagtgttcccatacta
aatttagtagatgttattttccagctgaaggatggtggttggataaggcggcaagcattt
tggatagctaagcagctgttacagttgggaatgggtgatgcttttgatgactggcttatt
gagaaaattcaacttcttagaacaggagtggtaattgcttctgcaatcaagcgtgttgag
caggttctatggcctgatgggattttcataactaaacatcctaagcgaaaagctactgca
cccatttcaactccaggcactcagagcaacctaaagagcaatccattgacttatgaacaa
caagtagaagctgatcgtcgtgccaaatttgtgtatgaactaatatatcttttttcaaca
gagaaagcgccacctgctcttgttggtcttgttggccgaaaggaatatgaacagtgtgcg
caggatatatttttcttccttcagtctcctttttgcttgaagcactttgcgtttgaactc
cttgagctgttgcttttgtcgaccttccctgagctcagtgaggttgtcagggaatgccat
gaagaaaaagtatcaatttag
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