Zingiber officinale (ginger): 122046553
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Entry
122046553 CDS
T08725
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122046553
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
122046553
Ion channels [BR:
zof04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122046553
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
IQ
DUF3382
DUF7373_C
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
122046553
NCBI-ProteinID:
XP_042463238
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Position
2B:102264685..102267959
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AA seq
719 aa
AA seq
DB search
MALLFAKLRSFLSWSNGLLWRAKDAATASSGSDGDDDIIESGHRTLPSAEAVPSVECYAC
TQPGVPTFHSTTCDRVNSPEWEACAGSSLIPIRPSQTNVLLNLGRPSKPASLFTGPALDP
RSETVQRWNRAILLARALAVAVDPLFFYALSIGRNGRPCLYMDGGLTAIVTALRTAADAV
HVFHVWLQFRMAYVSRESLVVGCGKLVWDARMIAAHYLRSLSGFWFDVFVILPVPQAVFW
LIVPKLIREEEIKLLMTILLLIFVFHFLPKVYHSISVMRKMQKVTGYVFGSIWWGFGLNL
IAYFIASHVAGGCWYVLAIQRVAACLRQQCEKNNDCNLASLACSKEVCYQFPSSANNLDC
ESNFAGMNNTPVCLNGDGPFSYGIYSWALPVVSSNSLVVKILYPIFWGLMTLSTFGNDLE
PTSHWLEVIFSIIVVLSGLMLFTLLIGNIQVLLHAVMARKRKMQLRSRDMEWWMKRRQLP
SRLRLRVRQYERQRWAVTRGEEELEIIKDFPEGLRRDIKRHLCFDLIKQVPLFHNLDNLI
LDNICERVKPLVFSKGEKVIREGDPVQLMVFVVGGQLKSSQRLSKGVVATCNLGPGSFLG
DELLSWCLRRPFTDRLPASSATFECLEPTEAFGLDAPDLRYITEHFRYRFANDRMKRAAR
FYSSNWRTWAAVIIQLGWRRYKARTRGTVSSAPEHGDSERRLRLYAAMFMSIRPQDHLD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcttttcgctaagcttcgctctttcctctcatggtcaaatggattgctatgg
agggcgaaggacgccgccactgcgagctcgggcagtgatggcgacgacgacatcatcgag
agcggccaccgcactttgccttcggcggaagctgtgccgtcggttgagtgctacgcgtgc
acacagcccggcgtgccgaccttccactccactacctgcgaccgcgtcaactccccggag
tgggaggcctgcgccggttcctcgctgatccccatccgccccagccagactaacgtgttg
ttaaacctcggtcggccgagcaagcctgcgtcgctgttcaccgggccagcgttggacccc
cgcagcgagacggtgcagcgatggaaccgcgcgatcctgctggcccgcgccttagccgtc
gcggtcgaccccctgttcttctacgcgctgtccattggacggaacggccgaccctgcctg
tacatggacggcgggctgacggcgatcgtcacggcgctgcgcaccgccgccgacgctgtg
cacgtcttccacgtgtggctgcagttccggatggcctacgtgtcgcgggagtcgctggtg
gtcggctgcgggaagctggtgtgggacgctcgcatgatcgccgcccactacctccgttcc
ctcagcggcttctggttcgacgtcttcgtcatcctccccgtcccgcaggctgtgttctgg
ttgatagtgccgaaattgatcagggaggaggagataaagcttctgatgacaatacttctc
cttatctttgtgttccatttcctgccaaaggtatatcatagtatctctgtgatgaggaag
atgcagaaggtcactggttacgtctttggatcaatctggtggggttttggcctcaacctc
atcgcctatttcatcgcttctcatgttgctggtgggtgttggtatgttcttgcgatccaa
cgcgtggcggcgtgtcttcgacaacagtgcgagaagaacaacgactgcaaccttgcttct
ctggcctgctccaaggaagtttgttaccagttcccgtcctctgccaacaatttggactgt
gaaagtaattttgcaggaatgaacaatactccagtgtgtttgaacggtgacggcccgttt
tcctatggaatctacagttgggctcttcctgttgtttccagcaactcacttgtcgtcaag
atcctctatcccattttctggggcctaatgactctaagtacgtttggcaatgatcttgag
cctacaagtcattggctggaagttatattcagcataatcgttgttcttagtggcttgatg
ctgttcactttgttgatcggaaacattcaggtgctgttgcatgctgtaatggcgcggaag
cgaaagatgcagctgcggtcgcgcgatatggaatggtggatgaaacggagacagttgccg
tcgagattgagactgagagtgcggcagtacgagcggcagcgatgggcggtgaccagaggg
gaggaggagctggagataatcaaagattttccggaaggcctacgccgagacatcaaacga
catctctgcttcgatctcattaaacaggtgccgttgtttcacaacttggacaatctcata
ctggacaacatatgcgaaagagtgaaaccgcttgttttctccaagggcgaaaaggtgatc
agagaaggggatccggtgcagctcatggtgttcgtggtcggtggccagctgaagagcagc
cagcgcctgagcaaaggtgtggtggccacttgcaatctcgggcccgggagcttcctcgga
gacgagctcctctcgtggtgcctccggcggccgttcaccgatcggctgccggcctcctcc
gccaccttcgagtgcctggagccgacggaagccttcggcctggacgcccccgatctcaga
tacatcaccgagcacttccgatacagattcgccaacgaccggatgaagcgagcggcgaga
ttctactcgtcgaactggcgaacgtgggcggccgtcatcatacaactcggctggcgccgg
tacaaggcgaggactcgtggcacggtgagcagcgcgccggagcacggtgacagcgaacgg
cggctgcggctgtacgctgccatgttcatgtcgatccggcctcaggaccatctcgattag
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