Zingiber officinale (ginger): 122046562
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Entry
122046562 CDS
T08725
Name
(RefSeq) 25.3 kDa vesicle transport protein-like
KO
K08517
vesicle transport protein SEC22
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
zof04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122046562
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122046562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122046562
Membrane trafficking [BR:
zof04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
122046562
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
122046562
NCBI-ProteinID:
XP_042463254
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All DBs
Position
2B:complement(102389220..102394188)
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AA seq
218 aa
AA seq
DB search
MVKLTMIARVTDGLPLAEGLDDGRDQKDADFYKQQAKLLFKNLSKGHYEASRMSIETGSY
FFHYIIEGRVCYLTMCDRSYPKKLAYQYLEDLKNEFERVNGNQIETAARPYAFIKFDTFI
QKTKKLYLDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSELSNRLTSESRV
YADKAKDLNRQALIRKWAPVAIVLGVVMLLFWIRKKIW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagttgacaatgatagcacgtgttactgatggcctacctttagcagaaggattg
gatgatggtcgtgaccagaaagatgctgatttttacaagcagcaagcaaagcttttattt
aagaatctctcaaaagggcattacgaggcttctagaatgtcaattgagactggctcatac
ttcttccactacattattgagggtcgtgtttgttacctaacaatgtgcgatcgttcctac
cccaagaagcttgcttaccaatacttggaagaccttaagaatgagtttgaaagagtcaat
ggaaatcaaattgaaacagctgcaagaccttatgcttttatcaaatttgatactttcata
cagaagactaagaaactttatttagatactcgtacccagcgaaatattgctaagctgaat
gatgaactgtatgaagtccaccagataatgactcgcaacgtgcaggaggttcttggtgtt
ggtgaaaagttagaccaggtcagtgaattatccaaccggttgacatctgagtcccgagtc
tatgctgataaggctaaggatctaaatcgacaggctttgattagaaaatgggctccggtc
gccattgtgcttggagtcgtcatgctcctcttctggattagaaagaagatttggtga
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