Zingiber officinale (ginger): 122046636
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Entry
122046636 CDS
T08725
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122046636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122046636
03016 Transfer RNA biogenesis [BR:
zof03016
]
122046636
03012 Translation factors [BR:
zof03012
]
122046636
04131 Membrane trafficking [BR:
zof04131
]
122046636
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122046636
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122046636
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122046636
Translation factors [BR:
zof03012
]
Eukaryotic type
Elongation factors
122046636
Membrane trafficking [BR:
zof04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122046636
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122046636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
FlpD
Motif
Other DBs
NCBI-GeneID:
122046636
NCBI-ProteinID:
XP_042463356
LinkDB
All DBs
Position
2B:complement(104617851..104621562)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGILKPGILVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELLTKIDRRSGKEIEKEPKFLKNGDAGFVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKAALKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaaggttcacattagcattgtggtcattggccatgttgattctgggaaa
tctacaaccactggacatctcatctacaagctggggggtattgataagcgtgttattgag
agatttgagaaggaagcagctgagatgaacaagcgttcatttaagtatgcctgggtgctt
gacaagctgaaagctgagagagagcgtggtatcaccattgatattgctctgtggaaattt
gagacaacaaagtactactgcacagttattgatgccccaggccatcgtgatttcatcaag
aacatgatcactggaacttctcaggctgactgtgctgttctcatcattgattcgacaact
ggtggttttgaggctggtatttcaaaggatgggcagactcgtgaacatgcactccttgct
ttcactcttggtgtcaagcaaatgatttgttgctgcaacaagatggatgccactactcca
aaatactcaaaggcacgatatgatgaaattgtgaaggaagtctcttcttacttgaagaaa
gttggttacaaccctgataagattccttttgttccaatctctggctttgaaggggataac
atgattgagagatccacaaatcttgactggtacaagggcccaacacttcttgaagccctt
gacttgatcaatgagcccaagcgtccaacagacaagcccctccgtcttcctttgcaggat
gtttacaagattggtggcattggaactgtccctgttggtcgggttgagactggaatcttg
aagcctggtattcttgtgacttttggtccttcaggactcacaactgaagtcaagtccgtg
gagatgcaccatgaggcactccaggaggctctaccaggtgataatgttggcttcaacgtt
aagaatgttgctgtgaaggatttgaagagaggttttgttgcctctaactccaaggatgac
cctgcaaaggaggctgctaacttcacctcacaagttatcatcatgaaccatcctggacaa
attggcaatggttatgctccagtcttggattgtcacacctctcacattgctgtcaaattt
gccgagttgcttaccaagattgataggcgatctggcaaggagattgagaaggagcctaag
ttcctcaagaacggtgatgctggttttgtgaagatgattcccaccaagccaatggtagtt
gaaacattcgccgagtatcctcctctcggtaggtttgctgtcagggacatgaggcagaca
gttgcagttggtgtcatcaagagcgtggagaagaaggatccaactggtgccaaggtcacc
aaagcagccctgaagaagaaatga
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