Zingiber officinale (ginger): 122046812
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Entry
122046812 CDS
T08725
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122046812
04120 Ubiquitin mediated proteolysis
122046812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122046812
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
122046812
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
122046812
NCBI-ProteinID:
XP_042463640
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Position
2B:complement(111417460..111434099)
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AA seq
744 aa
AA seq
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MSMHERKTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPHD
YSQQLYDKYRESFEEYITSMVLPSLREKHDEFMLRELVKRWLNHKVMVRWLSRFFHYLDR
YFIARRSLPPLNEVGLTCFRELVYHEVKGKVKDAVISLIDRECEGEQIDRALLKNVLDIF
VEIGLGNMECYENDFEADLLEDTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVAH
YLHSTSEQKMLEKVQHELLFAYASQLLEKEHSGCHALLRDDKVEDLSRMYRLFCRISRGL
DPVSQIFKQHVTAEGTALVKQAEDAASTKKAEKRDVVGLQEQVFVRKIIELHDKYLAYVN
DCFQNHSLFHKALKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGTEKLSDEAIEETLE
KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM
VTDLTLARENQSSFEEYLNTNSQANPGIDLTVTVLTTGFWPSYKSFDLNLPVEMVKCVEV
FREFYQTKTKHRKLTWIYSLGTCNINGKFEPKTMELIVTTYQAAALLLFNASDRLSYQEI
MAQLNLGDDDVIRLLHSLSCAKYKILNKEPNTKSISSNDVFEFNSKFTDKMRRIKIPLPP
VDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDFKAIKKR
IEDLITRDYLERDKDNPNIFRYLA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcacgagaggaagacgatcgatttggagcagggatgggagttcatgcagaag
ggtatcaccaagctgaagaacatcttggaggggctcccggagccgcagtttagctcggag
gactacatgatgctctacacgactatatacaacatgtgcactcagaaacctccgcacgat
tactcgcagcagctatacgacaagtacagggagtcttttgaggagtacatcacttccatg
gtattgccatctttgagagagaaacatgacgaatttatgctgagggaattagttaaaaga
tggttaaatcataaagtcatggtcagatggctttctcgtttttttcattatcttgatcgc
tatttcattgcacggaggtcacttcctccgctgaatgaagttggccttacttgtttccgt
gagctggtttatcatgaggtcaaagggaaggttaaagatgctgttatttctctgattgat
cgagaatgcgagggggagcaaattgatcgcgctttgttgaagaatgtcttggacattttt
gtggagattgggttgggtaatatggaatgttatgaaaatgactttgaagcagatctactc
gaggatactgcagcctattattctaggaaagcttcaaattggattctagaagattcatgc
ccagattacatgttaaaggctgaagagtgcttaaagcgtgagaaagatagggtagctcat
tacttgcattctactagtgaacagaagatgctagagaaagtgcaacacgagttgctgttt
gcatatgccagccaacttctggaaaaggaacattctgggtgccatgccttacttcgagac
gacaaggtggaggacctctcacgtatgtataggctcttttgcagaatatctcgtggtctt
gatcctgtttctcaaatatttaagcagcatgtgactgctgagggtacagccttggtcaaa
caagcagaagatgctgcaagtaccaagaaggcagagaaaagggatgttgttggtttgcaa
gaacaggtttttgttagaaaaattattgaactccatgacaaatacttggcctatgtgaat
gactgctttcagaatcactctctattccataaggcactgaaagaagcttttgaggttttc
tgcaacaagggtgttgctggcagctcaagtgctgagttgctagctactttctgcgataat
atccttaagaaggggggaaccgaaaaactcagtgatgaagccattgaagagacactagag
aaagttgtaaagctacttgcatatatcagtgacaaagatctgtttgctgagttctatcgg
aagaagcttgctaggagattactttttgacaaaagtgctaatgatgaccacgagaggagt
attttgacaaagctaaagcagcaatgtggcggacagttcacctcaaaaatggagggcatg
gtgactgatctaactcttgccagagaaaatcaatctagttttgaagaatatctcaacaca
aattctcaagcaaatccggggatagatctaacagttactgttttgacaactggattttgg
ccaagttacaaatcatttgatctcaacctccctgtagagatggttaagtgtgtagaagtt
ttcagagagttttatcagaccaaaaccaaacacagaaagcttacatggatctattctttg
ggcacatgtaacatcaatggcaagtttgagcccaagacaatggaacttattgtgacaact
tatcaggcagccgccctgctgttgtttaatgcttcggacagattgagttatcaagagata
atggcgcagcttaacttgggtgatgatgatgtcatcagattgcttcactccctttcttgt
gccaagtataagattctcaataaagagccaaatacaaaatctatttcttcaaatgatgtt
tttgagttcaattccaaattcactgacaaaatgagaaggatcaagatacctttaccccca
gtggatgagaagaaaaaagtaatagaagatgttgacaaagatcgacggtatgctattgat
gcctctattgttcgaattatgaaaagtcggaaagtattgggccatcagcagttggtgatg
gaatgtgttgaacagcttggtcgcatgttcaagcctgacttcaaagcaattaagaaaaga
atagaagatctaatcacgagagattatttggagagagacaaggataacccaaatattttc
agatacttggcttga
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