Zingiber officinale (ginger): 122046911
Help
Entry
122046911 CDS
T08725
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00531
Glycosaminoglycan degradation
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122046911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zof00536
]
122046911
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
122046911
Glycosaminoglycan binding proteins [BR:
zof00536
]
Heparan sulfate / Heparin
Enzymes
122046911
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
122046911
NCBI-ProteinID:
XP_042463801
LinkDB
All DBs
Position
2B:117921582..117924517
Genome browser
AA seq
545 aa
AA seq
DB search
MSRVSNGGVLPQLLGCCLFLCLSRHVAAYSEAGAYGDAVIVDGEAPIAVTDEDFICATLD
WWPPEKCDYGTCSWGSASLLNLDLSSPILLNAVKAFSPLKLRLGGTLQDKVTYQTLVPAQ
PCTHFVKNESEMFGFTQGCLPLPRWDELNEFFKKSGAVIIFGLNALNGRVLRSDGSFEGP
WNCTNAASLIRFTVNKGYTIHGWEFGNELSGSGVGTSVDADQYAADVINLKWLVDDIYRG
FPVKPLVLAPGGFFDADWFAELVRKTKPNSLDVVTHHIYNLGAGVDEHLVEKILDPTYLD
GEASTFRDLQGLLRNSGTNVKGWVGEAGGAYNSGRHLVTDSFVFSFWFLDQLGMSATYDT
KTYCRQTLVGGNYGLLNTTTFHPNPDYYSALLWHRLMGTRVLSTNLTGKLPNSIRAYAHC
AKESRGITLLLINLSGNTTTRVPIISKTAYSLGRKDLWAGGSGFRGNIPGLPPAESTREE
YHLTAQGGDLHSQTMLLNGNALKVDENGNIPMMMPVRVEASQPVTLAPYSIVFAHIPFFQ
APACR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggtctctaatggcggtgttcttcctcagctgctggggtgctgtttgtttctg
tgcctaagcaggcatgttgctgcatactctgaagcaggggcatacggcgacgctgtcatt
gtcgacggggaagcccctatcgccgtgactgatgaagacttcatctgcgctactctggac
tggtggccgccggagaagtgtgattatgggacatgtagctgggggtcggcatccctgctc
aacctggatctttccagtcccatcttgttaaatgccgtaaaagctttctcgccgctgaag
cttcgtctcgggggtaccttgcaagataaggtgacataccagacattagtccctgcgcag
ccttgcacgcatttcgtcaagaacgagtccgagatgtttggttttactcaaggctgctta
cctttgcccagatgggacgaactgaacgagttcttcaagaaatcaggggccgtcataatc
tttggcttgaatgcactaaatggaagggttcttcggagcgatggctcatttgagggacct
tggaactgcactaacgctgcttctctcattcgcttcacggtcaacaagggctacacaatt
cacggttgggagttcggaaacgagctgagtggatcgggagtgggaaccagtgtcgatgcg
gatcagtatgccgcagacgtgatcaatctcaaatggctcgtcgacgacatctaccgcggc
ttcccagttaaaccgctggtgctagcgccggggggtttctttgacgccgactggttcgcg
gagctcgtccggaaaacaaaacccaactcgttggacgtggtcactcaccacatttacaac
ctcggcgcaggcgtggacgagcatttggtcgagaaaattctggacccgacctatctggac
ggcgaagcgagcacgttcagagatctacagggcctgctcaggaacagcgggactaacgtc
aagggctgggtaggtgaggctggaggggcttacaacagcggccgccatctagtgactgac
tccttcgttttcagcttctggttcctggaccagctcggcatgtccgccacctacgacacc
aagacgtattgccggcagacgttggtcggcggaaactatggcctcctgaacacgaccacc
ttccatccaaatcctgattactacagtgctctgctgtggcaccggttgatgggaacccgg
gtcctgtcgacgaatttaaccggcaaattacccaattcgatacgagcttatgctcactgc
gcgaaagaatcacgaggaatcacactcctgttgatcaatctcagcggcaacaccacgact
cgggttccgatcataagcaagactgcttattcactcggccggaaggatctctgggctggt
ggatcaggattcaggggaaatattcctggtctgccgccggcggaaagcacaagggaagag
taccacctgacagcccagggcggtgacctccatagccagaccatgctgctcaatggcaat
gccttgaaagtagatgagaatgggaatattccgatgatgatgcctgttcgagttgaagca
tcgcagccagtcacactggccccgtattctatcgtcttcgctcacattcccttcttccaa
gctccggcatgtaggtag
DBGET
integrated database retrieval system
