Zingiber officinale (ginger): 122046946
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Entry
122046946 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein ROC5-like isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122046946
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
122046946
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
122046946
NCBI-ProteinID:
XP_042463839
LinkDB
All DBs
Position
2B:complement(120109515..120114255)
Genome browser
AA seq
785 aa
AA seq
DB search
MSFGGLFDGGNGGGAHLVADMAYGTSARAITHPSVLSPPLHLSSMFSSPGLSLALQTNLT
ARGDQNSEPVAGGIGSGELDSARRNKEDENDSKSGSDNLDGGSGDDLELENPRKKKRYHR
HTPKQIQELEALFKECPHPDEKQRMELSKRLCLEPRQVKFWFQNRRTQMKTQIERHENAI
LRQENDKLRAENLSIREAMRNPMCCNCGGPAVLGEISLEEQHLRVENVRLKDELDRVCAL
VGKFLGKPISNLSTLPPPSLPFIPNSSLELANGLASVPPLSTVMSPTRAIAGGGAAFSGV
EKSQERYVFLELALAAVEELVKMAEMEEPLWVLCSNTGRETLNYDMYDQCFARCLGPRPP
GFVSEASRETGVVVINSSALVETLMDASRWADMFPSVIARTTTADVISVGVGGTKNGVLQ
LMHAELQVLSPLVPVREVQFLRFCKQLTDGAWAIVDVSVDATKGDQLKCRRLPSGCVVQD
TPNGYSKVTWVEHAEYDEVMIHPLYRPLLRSGLALGARRWLATLQRQCQSLAILMSSSIP
ADDSTAAIMPAGRRSMLKLAQRMTENFCAGVCASSAREWSKLGGGVNIGEDVRVMTRQSV
ADPGEPPGVVLSAATAVWLPVSPQRLFDFLRDEQQRSQWDILSNGGPMQEMAHIAKGQNA
GNAVSLLRASAANANQSSMLILQETCTDASSSLVVYAPVDIPAMHLVMNGGDSAYVALLP
SGFAILPDGGSGGLKPQDGSLLTVAFQILVNSQPTAKLTVESVETVNNLISCTVQKIKAA
LNCEA
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcggaggtttgttcgacggcggcaacggaggtggcgctcatctcgttgccgac
atggcgtatggaacctccgccagggccatcacccatccgtccgttctctcgcctccgctc
catctgtcctccatgttcagctcccctggcctctcccttgcgctgcagaccaatctcact
gctcgtggagatcagaactcggaacctgttgccggaggtataggctccggcgagttggat
tcggctcgcaggaacaaggaagatgagaacgacagcaagtcgggcagcgataacttggac
ggcggatctggagacgatttggagctagagaaccctcggaagaagaaacggtaccaccga
cacacccctaagcagatccaagaactggaagccctcttcaaggaatgccctcacccggat
gagaagcaaaggatggagctcagcaagcggttgtgcttggaaccccgtcaggtcaagttc
tggttccagaaccggcgaacgcagatgaagacccaaatcgaacgacacgagaatgcaatc
ctccggcaggagaacgacaagcttcgagcggagaacttgtcgatcagggaggcgatgagg
aacccgatgtgctgcaactgcggtggtccggcagtgctcggcgagatctccctcgaggag
caacatctacgggtggagaacgttcgcctcaaggacgagctcgaccgggtctgtgctctc
gtcgggaagttcctcggcaagcctatctcgaacctctctaccttgccgccgccgtctctc
cccttcattccaaactcgtctttagagctcgcaaacggtcttgcctccgtgccgcccctg
agcaccgttatgtctccaacaagagctatcgccggtggtggagcggctttcagcggagtg
gagaaatcgcaggagaggtatgtgttcctggagcttgcacttgccgccgtcgaagaactg
gtaaagatggcagagatggaggagccgctgtgggtgctatgctcgaacaccgggagggag
acgctaaactacgacatgtacgatcagtgcttcgcgcggtgcctcgggccgaggcctccc
ggtttcgtctccgaggcctcgagggagacgggcgtcgtcgtcatcaacagctccgccctc
gttgagactctcatggacgccagtcgatgggcagatatgttcccttcggtgatcgcaaga
acgaccactgccgacgtgatctccgtcggagtgggcgggactaaaaatggcgtcctccag
cttatgcacgcagagctgcaagtgctgtctcccttggtccctgttcgcgaggtccagttc
cttcgcttctgcaagcagctcaccgatggcgcctgggccatcgtcgatgtctcggtcgac
gcgaccaaaggcgaccaactgaagtgccgcaggctcccctctggctgcgtggtgcaagac
acgcccaatggctactccaaggtcacgtgggtggagcatgccgagtacgacgaggtcatg
atccatccgctgtaccgcccgctgctgcgttccggcctcgccctcggcgcccgccgctgg
ctcgccaccctccaacgccagtgccagtccctcgccattctcatgtcctcctccattccc
gccgatgacagcacagcagcgatcatgccggcggggaggcggagcatgctgaagctggcg
cagaggatgacggagaacttctgcgcgggggtgtgcgcgtcgtctgcgcgcgagtggagc
aagctgggcggcggggtgaatatcggcgaggatgtgcgggtgatgacgaggcagagcgtg
gcggaccccggggagcctccgggggtggtgctgagcgccgccaccgcagtgtggctgccg
gtctcgccgcagcggctatttgacttcctccgcgacgagcagcagcggagccagtgggac
atcctctccaacggcgggcccatgcaggagatggctcacatagccaaggggcagaacgcc
ggcaacgctgtctcacttctccgtgccagcgcggcaaacgcaaaccagagcagcatgctg
atcctgcaggagacctgcactgacgcgtccagctcgctggtggtgtatgcgccggtggac
attccggcgatgcacctagtcatgaacggaggcgactcagcctacgtcgccctcctccct
tccggcttcgccatcctccctgacggcggcagcggtggcttgaagccacaggacggctcc
ctgctgacggtggcgttccagatcctggtgaacagccagccgacggccaagctgacggtg
gagtcagtggaaacggtcaacaacctcatttcctgcaccgtccagaagatcaaggcggct
ctcaactgcgaggcctag
DBGET
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