Zingiber officinale (ginger): 122047074
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Entry
122047074 CDS
T08725
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial-like
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00280
Valine, leucine and isoleucine degradation
zof01100
Metabolic pathways
Module
zof_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
122047074
Enzymes [BR:
zof01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
122047074
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GFIT
Motif
Pfam:
CPSase_L_D2
MCCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
BSH_CusB
ATP-grasp_3
BSH_RND
ATP-grasp_4
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
122047074
NCBI-ProteinID:
XP_042464042
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Position
2B:127177260..127191858
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AA seq
741 aa
AA seq
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MAIMATLVRRRLPIGTLIWNSHPGFSLRRFFSSPAAAAGEPERGIEKILVANRGEIACRI
MRTAKRLGIRTVAVYSDADSSSLHVKSADEAVRIGPPPARASYLNASAIVEAARRTGAQA
VHPGYGFLSESADFAQLCETEGLIFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGD
NQDANLLKLEAEKIGYPILIKPTHGGGGKGMRIVQRPDEFIEAFLGAQREAAASFGINTI
LLEKYITHPRHVEVQVFGDKHGNVIHLNERDCSVQRRHQKIIEEAPAPNVTHEFRSHLGK
AAVSSAKAVGYYSAGTVEFIMDTISGEFYFMEMNTRLQVEHPVTELIVGQDLVEWQIHVA
NGGHLPLNQEQVPLNGHSFEARIYAENVPKGFLPATGTLHHYRPVPVSSTVRVETGVEEG
DTVSMHYDPMIAKLVVWGENRYAALGKLKNCLHNFQVAGLPTNIAFLNTLSDHWAFKKGL
VETHYIEHFKNDLFPDELPKEMYDVAIQNATVVAACICEVEKITSRETIPSDNPLLSLWY
SHTPFRMHHNAKRLIELEWDKELIGSFEEILKLVITYQPDGSYLVETEGGDPPGLEVKVM
HVGNRDYRVDVNGLQTDVTLAIYSKERNKHFEVWQGKHHHHFRQSAKLHQSSDNELEHKT
NFQTSHPKGSVLAPMAGLVVKVLLQNGAFVEEGQPILVLEAMKMEHVVKSPRAGYLNDLQ
VSAGQQVFDTTVLFNIKDKQD
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcgataatggcgacgctcgttcgtcgcagactcccgatcgggactctgatttggaat
agccaccctggtttctcacttcgtagattcttttcttcgccggcggcggcagcgggagag
ccggagcggggcatcgagaagatccttgtggcgaaccggggagagatcgcctgccggatc
atgcgcactgctaagaggttgggaatccggacggtcgcagtctacagcgacgccgacagt
tcctccctccatgttaagtccgccgacgaggccgtccgaatagggccgccccccgcccga
gctagctacctcaatgcgtccgcgatcgtcgaggccgctcgtcgtacgggagctcaggct
gtccacccaggttatggtttcctctcagaaagtgctgatttcgcacagctttgcgagact
gaagggctcatatttattggtcctccagcatccgccataagagacatgggcgataaaagt
gcatcaaagagaatcatgggcgcagcaggtgtacctttagtgcctggttatcatggtgac
aaccaagatgccaatctcttgaaattagaagctgaaaagattgggtatcctattttgata
aaacccacacatggaggtgggggaaagggtatgagaattgttcaaaggcctgatgaattt
atcgaagcttttctgggagcacaacgtgaagctgcagcttcctttgggataaacactatc
ttactagagaaatatataactcatccccgccatgttgaagtgcaggtatttggagataag
catggaaatgtaatacatctaaatgagagagattgcagtgtgcaaagaagacatcagaag
attattgaagaagctccagcaccaaatgtcacacatgagtttcgttcccatttaggtaaa
gctgcagtttcttctgccaaggcagttggttattacagtgctggaacagtagaatttata
atggacaccatctcaggggagttctacttcatggagatgaatactcgtcttcaggttgag
catcctgtcactgagttgattgttggtcaagatcttgtggagtggcagattcatgttgca
aatgggggacatttaccattgaatcaagaacaagtgccgctgaatggccattcttttgaa
gctcgaatatatgccgaaaatgttccaaaaggatttctgcctgcaactggaacactacat
cactatcggccagttccagtttcatctactgtgcgtgttgaaactggagtggaggaaggg
gatactgttagcatgcactatgatcctatgattgctaaacttgtagtatggggagaaaac
cgatatgctgccttaggcaagctgaagaattgcttgcacaatttccaggttgctgggttg
cctaccaacatcgcattcctcaacacactttcagatcattgggcctttaagaagggtcta
gttgaaacacactatattgaacattttaaaaatgacctttttcccgatgaattaccaaag
gaaatgtatgatgttgctattcaaaacgcaacagttgttgctgcctgcatatgtgaagtg
gagaaaatcacatctagagagactattccaagtgacaatccgttactttcactgtggtat
agtcacacacctttcagaatgcatcataatgcaaaacgtctgatagaactagagtgggat
aaagaactaattggcagctttgaggagattctgaagcttgtgattacctaccaacctgat
gggagctacttggttgagactgaaggcggtgatcctcctggtttggaagtgaaggttatg
catgtaggaaatagagattacagagtagatgttaacggactgcagaccgatgtgactttg
gcaatatattcaaaggaaagaaacaagcactttgaagtttggcagggcaagcatcatcat
catttcaggcaatctgctaagcttcatcaatcaagtgataatgaattagagcacaaaacc
aatttccagacctctcatcccaaaggaagtgttttggcgcctatggctggtttggtggtt
aaggtgctgcttcaaaatggtgccttcgtagaggaaggccaacctattttggttcttgaa
gcaatgaaaatggagcacgtcgtcaaatctccccgtgctggctacttgaatgatcttcaa
gtttctgccggccaacaagtcttcgacaccactgtgctgtttaacataaaggataaacaa
gattga
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