Zingiber officinale (ginger): 122047077
Help
Entry
122047077 CDS
T08725
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122047077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122047077
Transporters [BR:
zof02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
122047077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
122047077
NCBI-ProteinID:
XP_042464047
LinkDB
All DBs
Position
1B:complement(3255630..3258842)
Genome browser
AA seq
557 aa
AA seq
DB search
MKADEELGGPDRGMAFETDDEDNLADHHYGSHASSLSSDTSSSHSDDDDHLGGDPSSYQT
TWPVSYRQSIDVFSSVPSPKVGFLAASSLVEKGSSFLRAEGSFLRPGASMLSNHDQEAAA
RHLVKPLLPPHPSFAAPDHGSVVLPSDGAHRGSFAFSSYVELPPPRQCSTAQAVINGLNV
LCGVGILSIPYAVKEGGWVGMFFLFALGSISFYTGMLLKRCLDSLPGLKTYPDIGQAAFG
LSGRLFISIVLYLELYGCCVEYITLVGDNLASIFPDASLNFLGAELSSSQIFAITTAFAV
LPTVWLKNLSLLSYLSAGGVLATLLVVLCLLWVGVVDQVGFHPGGSVLNLMDLPVALGLY
GFCYSGHSVFPNIYSSMEVPSQFPFVLMICFVVCTSLYAGVAAVGYLMFGDSLKSQFTLN
MPHQYLISKVAVWTTVVNPLSKYALTMTPVALSLEELLPSTSQSNFVMLLMRTFLVFSTL
VVALAVPFFASVMALLGSVFTMLVALILPCACYLSIKRKSVSFQEVLWCVFVIIIGLVCS
LVGSYSSIKQMIDQTKN
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggacgaagagttgggggggcctgaccggggcatggccttcgagaccgacgac
gaggacaacctcgcggatcaccactacgggtcccacgcctcctccctttcctccgacacc
tcctcctctcactccgacgacgacgaccacttgggcggcgacccgagctcgtaccagacc
acctggcccgtcagctaccgccaatccatcgacgtcttcagcagcgtgccgtcgccgaaa
gtagggtttctggcggcttccagcttggtcgagaagggcagctcgttcttgagggcggag
ggttccttcttgaggcccggcgcttccatgctttccaaccacgatcaggaggctgcggcg
cgtcatttggtgaaacccttgcttccgccgcacccttctttcgccgcgccggaccatggg
tcggttgttctcccctccgatggtgcgcatagaggctcttttgctttctcttcctacgtg
gagctgccgccgccgcgccagtgctccactgctcaagccgtgatcaatggtcttaatgtt
ctctgtggagtcggaattctatccatcccttatgcagttaaagaaggagggtgggtgggc
atgtttttcctgtttgccttgggatccatctcattttacactggaatgttgctcaagagg
tgcttagatagtttaccaggactcaagacatatcctgacattggtcaagcagcatttggt
ctctctggacgtctatttatatcaatagttctttacctagaactttatggttgttgtgtg
gagtacataactctagtgggtgataacttggcatcaatcttcccagatgcaagcttgaat
ttcttgggagctgaactaagttcttcccagatctttgctataaccacagcctttgctgtt
cttcccactgtttggctcaagaaccttagcttattatcctacctctcagctggcggagtg
ttagctacgttactggttgttctctgcttgctgtgggtaggtgtggtggatcaagttgga
ttccacccaggtggatccgtactcaatctaatggaccttcctgttgctcttggattatat
ggcttctgctactccggtcactctgttttccccaacatatattcttccatggaagtgcca
tctcaatttccatttgttctaatgatctgctttgtagtgtgtacaagtctctatgccggg
gtcgctgcagtaggctatttgatgtttggggattccctcaagtctcaatttacactgaac
atgcctcatcaatacttgatttctaaagttgcggtatggacaacggttgtgaatccgctg
tcgaaatatgcattgactatgactccagtcgccctcagtttagaagagctgctgccttct
acgagtcaatccaattttgtgatgcttttgatgagaacatttctagttttttccacattg
gttgtggcactcgcagtacccttttttgcatctgtaatggcattgcttggatccgtcttc
acaatgctagtggctcttattttaccttgcgcatgctatctcagtataaagcgcaaatct
gtgagttttcaggaggttttgtggtgtgttttcgttataattattggactagtgtgttcc
cttgttggatcatattcctccatcaagcagatgattgatcaaacgaagaattag
DBGET
integrated database retrieval system
