Zingiber officinale (ginger): 122047129
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Entry
122047129 CDS
T08725
Name
(RefSeq) upstream activation factor subunit spp27-like isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122047129
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
122047129
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GFIT
Motif
Pfam:
SWIB
DEK_C
CDC45
Nop14
Paf1
Motif
Other DBs
NCBI-GeneID:
122047129
NCBI-ProteinID:
XP_042464136
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Position
2B:128572430..128582427
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AA seq
403 aa
AA seq
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MVSDVELVERLREFVRCSDLSTTTTSSVRRRLEEDFGIDLSQKKGFIRDQVDLFLTELNE
NREAEEEEKAHDGLEVAKDEEEKAHDSSEAEKELNEEDEEGGSAESDNGDEEEEEGDKED
EDEDGEENDDGKSSRKRKTKEISKEVKKRGGGFTKLCSLSPLLQDFVGETELARTEVVKR
LWTYIREKDLQDPKNRRKIICDERLHTLFNVNSIDMFQMNKALSKHIWPLNSEESPVAPV
KPKESNKKPKKESDGQRQKGQSGFLMPLRLSNELIQFFGTGEDALSRADVVKRMWAYIKG
NNLQDPADKRNVICDEKLKELLKVDSFHGFTVSKLLTPHFIKSKDLVPCPSSNHEIGVLT
FYTDRDRPEPFVIVEAFGGSPRVANPQRNRLIASHGTTIWVIR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggtttcggacgtagaactcgtggagcggcttcgggaattcgtccgatgctccgacctc
tccacgactacaacttcttctgtccgccgccggctcgaggaggatttcggcatcgacctt
tcgcagaagaagggcttcattagggatcaggtcgacctcttcctgactgagcttaacgag
aatagggaggcggaggaggaggagaaggcccacgacggtctcgaagtagcaaaggacgag
gaagagaaggcccacgacagttccgaagcagaaaaggagttgaatgaggaagacgaagaa
ggaggaagtgccgagtcggataatggtgatgaagaggaggaggaaggagataaggaggac
gaggatgaggacggtgaggagaatgatgatggaaaaagcagcaggaaaagaaagactaag
gaaatcagtaaggaagtcaagaaacgaggtggtggttttaccaaactctgcagtctttcc
cctctactacaggattttgttggggaaactgagttagctagaactgaggttgttaagagg
ctatggacttatattcgtgaaaaggacttgcaagatccaaaaaatagaagaaagatcata
tgtgacgagagattgcacactctttttaatgtcaatagcattgacatgtttcaaatgaac
aaagctttgtcaaaacatatttggcctttgaactctgaagagagcccagttgctccagta
aaaccaaaagaaagtaacaagaagcccaagaaagaaagtgatggtcagcgtcaaaaagga
caatcaggctttcttatgccccttcgcctatctaatgaactcatacaattttttggaact
ggtgaggatgcactgtcaagggctgacgttgtcaaaaggatgtgggcttacataaaagga
aacaatttgcaggatcctgctgataagaggaacgttatctgtgatgagaaacttaaagag
cttttgaaggttgattccttccacgggttcacagtatcaaagttactgacacctcatttc
atcaagtcaaaagatttggtgccttgccccagctcaaaccatgaaattggtgttttaacc
ttctacacagacagggatcgaccagaaccatttgtcattgtagaggcatttggaggtagt
ccacgcgtggcgaatcctcaaaggaataggctaattgcttcacatggaactaccatctgg
gtgataaggtga
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