Zingiber officinale (ginger): 122047303
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Entry
122047303 CDS
T08725
Name
(RefSeq) cyclic nucleotide-gated ion channel 17-like
KO
K27629
cyclic nucleotide gated channel 17
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
zof04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122047303
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122047303
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
122047303
Ion channels [BR:
zof04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122047303
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
TssN
Motif
Other DBs
NCBI-GeneID:
122047303
NCBI-ProteinID:
XP_042464418
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Position
2B:132758772..132763109
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AA seq
712 aa
AA seq
DB search
MFGSRRFDDGMEVRKERTVRIYTDEKQNQAKTTLQGLKSGGYTSNGIGKVGTWKSIAFAE
DHKPWRTHILDPGSDTVLKWNRVFLISCLLALFIDPLYFYLPKVKKGDNTICIMMDDHVS
IPVTIFRTLADLLYIAHIVVKFRTAYVAPSSRVFGRGELVMDPKMIARRYLRSDFFIDLA
AALPLPQLLIWSAVRNSRVEHNNNALALIVLVQYIPRLYLIFPLSYQIIKADGVVTKTAW
AGAAYNLLLYMIASHVLGASWYLLSVERQTTCWRSECKNENGTTGPLCRPKYLNCAQLGH
PDHEAWAQATQVFGNCDANNPNITFNYGIFQNALTNEALSTEFIKKYFYCLWWGLQNLSS
YGQTLTTSTFIGETLFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWM
RHRQLPHDLQERVRRFVQYKWLATRGVDEESILRALPADLRRDIQRHLCLDLVRRVPFFS
QMDDQLLDAICERLVSSLSTEGTFIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNTIT
LRPGDFCGEELLSWALLPKSMANLPSSTRTVRALVEVEAFALRAEDLKFVANQFRRLHSR
KLQHTFRFYSHHWRTWAACFIQAAWHRYKRRKMARDLSMKESFNSRTDESGQEEDESNSY
SKSSSRPEQNLVGVTLHASKFAAAIRKGAQKIKGMPNLQKPSEPDFSSESYD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcggatccaggaggttcgacgatgggatggaggtcaggaaggagaggactgtaagg
atctataccgatgaaaagcaaaatcaagctaaaactacactccaaggcttgaagtcgggt
gggtatacctcaaatggaattggaaaagtcggcacctggaagtccatagctttcgctgag
gaccataagccatggaggacacacattcttgatccgggaagcgacactgtattgaaatgg
aatcgtgtttttctcatttcatgcttgcttgcactgtttatagatccattgtacttctat
ttgccgaaggtcaaaaagggcgataataccatatgtatcatgatggacgaccatgttagc
attcctgtcacaatttttaggacacttgctgaccttttgtacatagcacatattgtggtg
aaatttagaactgcatatgttgctccaagctcaagagtctttggccgaggggagcttgtt
atggaccctaagatgattgctagaagatatttgagatcagacttctttatagatctcgca
gctgcactccctctaccgcagctgctcatttggtcggcagtaaggaactcaagagttgaa
cataacaataatgctctcgcgctaattgtcctagtacagtatataccaaggctttatctc
atatttcctttaagttatcaaattattaaagctgatggtgttgtcacaaagactgcttgg
gctggtgctgcatataatctacttctctacatgatcgctagtcacgttctaggagcttca
tggtatctactatctgtcgaaaggcagactacatgttggcgatcagaatgcaaaaatgaa
aatggaacaactgggccactatgcagacctaaatatttaaattgtgctcaattaggtcat
ccagatcacgaggcatgggctcaggctactcaggtgtttggcaattgcgatgctaataac
cccaacatcactttcaactatggcattttccaaaatgcattaaccaatgaagccctctca
acggagttcatcaagaaatacttctattgcctttggtggggtttgcagaacctgagttcg
tatggccagactttgacaacaagcactttcattggagaaacattgtttgctatactaatt
gctattcttggcttggtcttgtttgcgcacttgattggaaacatgcagacctacctgcaa
tcaatcaccgtgagactggaagaatggagactaaaacgcagagacacagaagagtggatg
aggcatcggcaacttcctcatgatctgcaagaaagggttcgacgctttgttcaatacaag
tggcttgctactcgtggagtggacgaggaatccattttgcgggctttacctgccgacctt
cggcgagatattcaacgccacttgtgtttagacctcgttcgacgggttcctttcttctcg
cagatggacgatcaacttctagatgcaatttgcgagcgtctggtgtcttcactgagcaca
gaaggcacgttcatcgttcgggagggagaccctgtgactgaaatgcttttcatcattcgg
gggcgattagagagctcgacgaccaacggtgggcggacgggcttctttaatacgatcaca
ctgaggccaggtgatttctgcggcgaagaactgctttcctgggcgcttcttccgaaatcc
atggcgaacttgccttcctccactcggaccgtaagagcgctcgtcgaagtcgaggccttc
gcgctgcgggcagaggacctcaagttcgtcgcgaatcagttcaggcggctccacagccgg
aagttgcagcacacattccgcttctattcgcaccattggaggacatgggccgcttgcttc
atccaggcagcttggcatcgctacaagaggcggaagatggcaagggatctgagcatgaag
gagtcattcaactcgcgtacagacgaatcgggtcaggaggaagacgagagcaattcgtac
tcaaagagttcatctcggcccgagcaaaatctcgtcggagtcacacttcacgcgtccaag
tttgctgccgcgatcaggaagggtgcccagaagatcaaaggcatgcccaatttacagaag
ccgagcgagcccgatttctcttctgaatcttacgattga
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