Zingiber officinale (ginger): 122047334
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Entry
122047334 CDS
T08725
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINAT1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122047334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122047334
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122047334
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122047334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122047334
NCBI-ProteinID:
XP_042464460
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All DBs
Position
2B:complement(133361811..133366873)
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AA seq
319 aa
AA seq
DB search
MTNFLLGKKQTFASSSCTVQPIIMDESSSPPPMNLKSLKPKEQVQHQSAVNSSHGKSSFI
LPNSGIDKLLECPVCRNTMVPPIQQCPSGHTLCFSCKNKVNKCPICRKEIGQIRCLALEK
LAASLHVPCSYHHLGCTEMMPYYSKLQHKTHCVYRPYACPHPGSDCPFTGDIHELMSHLK
QCHKLDLQAGSTFNHRYVKQDPHSVDNCSWTLTLFNCFDRYFCLHFEAFVIGCEPVYMAF
IRFIGEESEARKFNYCLEIGGHGRKMKWQGVPRSIRTHHRMVRDSYDGLIVHRNLALYFS
GNDQKVLKLRVFGRIWKET
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaccaactttttgctgggaaagaagcaaacatttgcaagttcatcctgcactgttcag
cctataattatggatgaatcatcctctcctccaccaatgaatctcaagtctctcaagcca
aaggaacaggttcaacatcagtctgcagtgaattcatcacatggaaaatcttcattcata
cttccaaacagtggcatcgacaaactattagagtgccctgtctgcagaaacacaatggtt
ccacctattcagcagtgtccaagtgggcacactttgtgcttttcctgcaaaaacaaagtg
aacaagtgcccaatctgccgaaaggaaattggccaaatccgttgtttagcactggaaaaa
cttgctgcttcactccatgtaccttgctcataccatcatcttggttgcacagaaatgatg
ccctattacagcaagttgcagcacaaaacacattgtgtttaccggccttacgcatgccct
catcctggttcagattgtcccttcaccggagacattcatgaacttatgtcgcatctgaaa
caatgccacaaattggatcttcaagcaggaagcactttcaatcaccgttatgtgaaacag
gatcctcattctgttgacaattgctcatggactctaactctattcaactgcttcgaccgc
tacttctgccttcatttcgaagcgtttgtgatcggttgtgagccagtttatatggccttc
atccgtttcatcggtgaagagtctgaggcaaggaagttcaactattgccttgaaatcgga
ggccatgggcgcaagatgaaatggcagggtgtgcctcgaagcatcaggactcaccacagg
atggtgcgagacagctacgatgggcttatagttcaccggaacctcgccctttatttctcc
ggcaacgatcagaaggtgctgaagctgagagtctttggcaggatttggaaggagacttga
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integrated database retrieval system
