Zingiber officinale (ginger): 122047379
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Entry
122047379 CDS
T08725
Name
(RefSeq) transcription factor IIIA-like
KO
K09191
general transcription factor IIIA
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122047379
03021 Transcription machinery [BR:
zof03021
]
122047379
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122047379
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
122047379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
DUF7565
Zf-C2H2_ZNF451_1st
FOXP-CC
C2H2_ASCIZ
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
122047379
NCBI-ProteinID:
XP_042464560
LinkDB
All DBs
Position
2B:complement(135155250..135162539)
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AA seq
384 aa
AA seq
DB search
MMAAKSHASVEGTAADVNEGVDMNQKPRSRDIRRYYCQFCGICRSKKKLLRSHILTNHKD
EFDNAQLDEVDHANMLDGRVQHTCKECGASFLKPSHLKQHIQSHSIERPFTCSVDDCHAS
FKRKDHLTRHSLTHQGKLFACPVSNCNCKFGFKANIKRHVREIHEDESPCEGQQQYVCGE
PGCGKIFKYPSKLKKHEDSHVKLEYVEVVCNEPGCMKTFTNAECLKAHIKTSHLYVDCVI
CGTKHLKKNIKRHEHMHEASEVTERTKCNLEGCERTFSNVSNLRQHIKAVHQNLRPFACR
FSECGKKFPYKHVRDNHEKSGVHSYIQGDFLEIDEQWQSRPRGGRKRKCPSIGSFYRKRI
VSPEQVSILDNGVEYLRWLLSGEQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgctaaatcacatgcctcggttgaagggactgcagctgatgtcaatgagggg
gtagacatgaaccagaaaccacgttccagggacatcaggcgctactattgtcagttttgt
ggaatttgcaggtccaagaaaaagcttttgcgctcacacattctaaccaaccataaggat
gagttcgacaatgcacagttagatgaagtcgatcatgcaaatatgctggatggcagggtg
caacatacttgcaaagagtgtggtgcaagcttcctcaaaccatctcatctgaagcagcat
attcaaagtcactctattgagaggccttttacctgttcagtggatgactgtcatgccagc
tttaaaaggaaggaccatttaactcgccattcattgactcaccaaggaaaactctttgct
tgccctgttagtaattgtaactgcaagtttggattcaaggccaacataaagaggcatgtg
agagaaattcatgaagatgagtctccttgtgaaggtcaacaacagtatgtttgtggtgaa
cctggatgtgggaagatattcaagtatccctcgaaattgaagaagcatgaagattcacat
gttaaattggaatatgtggaagtcgtttgcaatgaacctggatgtatgaagacattcaca
aatgcagaatgccttaaagcacatatcaaaacttctcacctttatgttgattgtgtgatt
tgtggaacaaaacatctgaagaagaatattaaacgacatgagcacatgcatgaagcaagt
gaggtgactgagaggacaaaatgtaacttggaaggttgtgaacgcaccttttcaaatgta
tcaaatctcagacagcacataaaagcagtccatcaaaatcttcgtccatttgcatgcaga
ttttctgaatgtgggaagaaatttccctacaagcatgtcagggataaccatgaaaaatct
ggtgtgcacagttatatccaaggtgacttcctagaaatcgacgagcagtggcagtcacgg
ccacgaggtggacggaaaagaaagtgtccttctatcggatctttctacaggaagaggatt
gtttcacctgagcaagtatcaatacttgataatggagttgagtacttgagatggcttctt
tctggtgaacagtga
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integrated database retrieval system
