Zingiber officinale (ginger): 122047385
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Entry
122047385 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein ROC2-like
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122047385
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
122047385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
DciA_cyano_C
MRP-L20
Motif
Other DBs
NCBI-GeneID:
122047385
NCBI-ProteinID:
XP_042464569
LinkDB
All DBs
Position
2B:135422996..135427456
Genome browser
AA seq
782 aa
AA seq
DB search
MPVGIMIPARQAAASMMGRNAGTSFGSSSVLSLSQPNLLEGELQIPPLQYQHGNQFVDMA
PTTMTGESEMARAEADFESKSGGSENIEGASGDDQDQNTRPRKKRYHRHTQHQIQEMEAF
FKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSGLRAENEKLRAEN
MRYKEALSNASCPNCGGPAALGEMSFDEHHLRIENARLHEEIDRISGIAAKYVGKPMSIG
AAASYPLLSPTSSRSPLDLGYGVGEVFGAAGAVGELLRSVPAGGQSEIMDKPVVVELAVA
AMEELIRMAQLNEPLWLFPDGMNSCGEALNEEEYAQVFPRGIGPKPFGLKSEASRETAVV
IMNQMNVVEMFMDVNQWSNVFAGIVSKAMTIEVLSTGVAGNYNGALQVMSAEFQVPSPLV
PTRESLFVRYCKQHPDGTWAVVDVSLDSLRPSPVSRCRRRPSGCLIQEMPNGYSKVTWVE
HVEVDDRSVHNIYKPLVNSGLAFGAKRWVSTLDRQCERLASVMASNIPTTEIGVITSAGG
RKSMLKLAERMVMSFCGGVSASTTHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAA
TSFWLPVPPKRVFDFLRDETTRSEWDILSNGGVVQEMAHIANGQDQGNCVSLLRVNSSNS
NQSNMLILQESCTDVTGSYVIYAPVDVMAMNVVLNGGDPDYVALLPSGFAILPDGPASAG
AAGAVVEEVGSGGSLLTVAFQILVDSTPTAKLSLGSVATVNSLIACTVERIKASVAGEII
PH
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgggaatcatgataccagcgagacaagcagcagcttccatgatggggaggaac
gcaggcactagctttggctcctcctcagtcttgtccctcagccagccgaatttgttagaa
ggggaactgcagatcccgccgctgcagtaccagcacgggaaccagttcgtggatatggcg
ccaacgacgatgacgggggagagcgagatggcgcgggcggaggccgacttcgagagcaaa
tccggcggcagcgagaacatagagggcgcctccggcgacgaccaggatcagaacacgcgg
ccccgcaagaaacgctaccaccgacacactcagcatcagatccaagagatggaagcattc
ttcaaggaatgccctcacccagatgacaagcagagaaaggagctgagtagagagcttggg
ctcgagcctctccaagtcaagttctggttccagaacaagcgcactcaaatgaagaatcaa
catgagcggcatgagaacagcgggctgcgtgcggagaatgaaaagctgcgcgccgagaac
atgaggtacaaggaggccctcagcaacgcctcctgccctaactgcggtggcccagccgcc
ctcggcgagatgtccttcgacgaacaccacctccgcatcgaaaacgctcgtcttcatgaa
gaaattgataggatatcggggatcgccgccaagtacgtcgggaaaccgatgtcaataggc
gcagcggcgtcgtatcctctgctttctccgacgtcgtcacggtcgcctttggatctaggg
tatggagtcggagaagttttcggggctgcaggggcagtcggggagctgcttcgtagcgtg
ccggcaggaggacagagtgagataatggataagccggtggtggtggagctggcggtggcg
gcgatggaggagctcatccggatggctcagctcaacgagccgctgtggttgtttccggac
ggcatgaattcttgcggggaggcgctgaacgaggaggagtatgctcaggtgttcccgaga
ggaatcgggccgaagccgttcgggctcaagtcggaggcgtcgcgggagacggctgtggtg
atcatgaaccagatgaacgtggtagagatgttcatggatgtgaaccaatggtcaaatgtg
tttgcggggattgtgtcgaaggctatgacaatcgaagtgctatcaactggagtggcaggc
aattacaatggagctttgcaagtgatgtcagccgagttccaagtcccttctccacttgtg
cccacaagggagagcctcttcgtgagatactgcaagcagcatcctgacgggacttgggcc
gtcgtcgacgtttccctggacagcctacggcccagcccggtttccaggtgccggagaagg
ccctccggctgcttgatccaagaaatgcccaacggctactctaaggtgacttgggtggag
cacgtggaggtggacgaccggtcggtccataacatttacaagcctctggttaactcgggt
ttggcgttcggcgcaaagagatgggtcagcactttggaccgccaatgcgagcggcttgcc
agcgtcatggctagcaacatccccactactgagatcggtgtgataacgagcgccggagga
cggaagagcatgttgaagctggcggagcggatggtgatgagcttctgcggcggcgtgagc
gcgtcgacgacgcaccagtggacgacactgtcggggagcggggcggaggacgtgcgcgta
atgacgaggaaaagcgtggacgaccccggcaggccgccgggcatcgtcctcaacgccgcc
acctccttctggctccccgtccctcccaaacgcgtcttcgacttcctccgcgacgaaacc
acccgcagcgagtgggatatactctccaatggcggagttgttcaggaaatggctcacatc
gccaatggccaggatcaaggcaactgcgtctctcttctccgggtcaatagctcgaactcg
aaccagagcaacatgctgatactgcaggaaagctgcaccgatgtgacaggatcctacgtc
atttacgcccctgtcgacgtcatggccatgaacgtcgtcctcaacggcggcgaccccgat
tacgtggccctcctcccctctggcttcgccatcctgcccgacggcccagcctccgccgga
gcagctggcgccgtggtcgaggaggtaggctccggcggctccctactcaccgtcgccttc
cagatcctcgtcgactccacccccaccgccaagctctccctcggctccgtcgccaccgtc
aacagtctcatcgcctgcaccgtcgaacgcatcaaggcgtccgtcgccggcgagatcatc
ccccactaa
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