Zingiber officinale (ginger): 122047422
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Entry
122047422 CDS
T08725
Name
(RefSeq) poly [ADP-ribose] polymerase 1-like isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122047422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
122047422
03036 Chromosome and associated proteins [BR:
zof03036
]
122047422
03400 DNA repair and recombination proteins [BR:
zof03400
]
122047422
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
122047422
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
122047422
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
122047422
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122047422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
zf-PARP
PARP_reg
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
122047422
NCBI-ProteinID:
XP_042464644
LinkDB
All DBs
Position
2B:complement(138082339..138139762)
Genome browser
AA seq
987 aa
AA seq
DB search
MANPPKPWKAEYAKSGRSSCKTCKSPIDKEQLRLGKMVTATQFDGFMPMWNHAGCVFKKQ
NQIKSLDDVEGIDSLRWDDQKRIKSYVEGGASSGSTVATAVATTIADNECSIEVSQTSRA
TCRHCSQKILKGTVRVSTNAEGKGARGLLWHHVSCFITMSPSSSIEKVLGWDSLSPQDKE
AVSALYKREKSKHIEGNQATSQGAKRKTAGSNNQKPKVLKVDLNNSSDRGPSKGNKVPDY
DNSDTMELDNRLEMQSKLLWDIKDELKKEVSVAELREMLEANEQDSKGSEHDLRDRCADG
MLFGALDKCPLCSGSLCYSGGRYHCHGYLSAWSKCSYSTKEPVRLMEKWKIPKETTNKYL
IKWYRSQKTKKPERLLPPSASKSVIGHTSDSSQPSNDDKLEKLKVAIAGKSSADFEELKP
KLEAAGVKFHMKIMKDTSCLIWSGEVNNDDPQIKKARRMKLPIVREDYLHGCIRKQKKLP
FDSYKIEVASETSRSGVVTVKVKGRSAVHEASNLQETGHILEVGQSIYNTTLNMSDLSTG
INSYYILQIIQQDNGSDCCVFRKWGRVGNDKIGGMKFEWMSKSDAIQQFKHIFLEKTGNP
WEAWEQKINFQKQPGRFYPLDIDYGVKQAPKKNPSNLKSQLEPRLFELMKMLFNVETYRS
AMLEFEINLSEMPLGKLSKENIQKGFAALTEIQNSICNTTYAPAVKESLIVDASNRFFTF
IPSVHPHLIQHEDDIKAKVKMLEALKDIEIASRLVGFDRDDDMSLDEKYEKLQCGITPLS
HDSEDYQLVKKYLLNTHAPTHKDWSLELEEVFVLEREGECDKFAPFKDMKNKMLLWHGSR
LTNFVGILSQGLRIAPPEAPTTGYMFGKGIYFADLVSKSAQYCYVDKNDPVGLMLLSEVA
LGEIHELKKATYMDKPPKGKHSTKGLGKTVPLQSEFEMWRDQVVVPCGKPVSSTILASEL
LYNEYIVYNMAQVKMQFLLKVRFHHKR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcctccgaagccatggaaagccgaatatgccaagtccggacggtcttcgtgc
aagacctgcaagtcccccatcgacaaagaacaactacgccttggcaagatggtcactgcc
acccagttcgacggattcatgcccatgtggaatcatgctggttgcgtcttcaagaaacaa
aaccagataaaatcccttgatgatgttgaaggcatagactcattgcgttgggatgatcaa
aaaaggataaagagttatgttgagggtggagcctcaagtggtagtacagttgccaccgca
gttgcaactacaattgctgataatgagtgttccattgaagtttcccaaacttctcgtgct
acctgcagacattgtagtcagaagattctgaaaggaacggttcgtgtctcaactaatgct
gagggaaaaggtgctcgaggtctcttatggcatcatgtcagctgtttcatcactatgtct
ccatcaagcagtatagaaaaagttttagggtgggacagcctttcccctcaagataaagaa
gctgtttctgcactttataaaagggagaaatctaaacatatagaaggcaatcaagcaact
tcacaaggtgcaaagaggaagactgccgggtcaaacaatcagaaaccaaaagttctcaag
gttgatctaaacaattcatcagacagaggaccaagcaaaggaaacaaagtgcctgattat
gataattctgacaccatggaactggacaatagattggaaatgcagagcaagctgttgtgg
gatataaaagatgagcttaaaaaggaggtgagtgtggctgagctgcgggagatgcttgaa
gcaaatgaacaggattcaaaaggatctgaacatgatctccgagatcgttgtgctgatggg
atgctatttggtgcattggataaatgcccactctgctctggttctttgtgttactctgga
ggccggtatcattgtcatggttatttgtcagcatggagcaagtgttcatactcaacaaag
gaaccagtacgccttatggaaaaatggaaaattcctaaagaaacgactaacaagtatctt
ataaaatggtacaggtctcaaaagactaagaaacccgaaagacttcttcctccctccgct
agtaagtctgtcattgggcatacatctgattcatctcagccatccaatgatgacaagttg
gagaaattaaaagttgctattgctgggaaatccagtgcagatttcgaagaactgaaacca
aaacttgaggcagctggagtaaaatttcatatgaaaatcatgaaagatactagctgtttg
atatggagtggtgaggtgaacaatgatgatcctcaaataaaaaaagcaaggaggatgaaa
ttgcccattgttagggaagattaccttcacggatgcattagaaagcagaagaagcttcct
tttgactcgtacaagattgaggttgcttcagaaacctcaagaagcggtgttgtcactgta
aaagtgaaaggaagaagtgctgtgcatgaggcttctaatttgcaggaaactggtcatatt
ttagaagttggacaaagcatctataacactactttaaatatgtctgatctttctactggt
ataaacagttactacatccttcagataatccaacaagataatggttcagactgctgtgtt
ttccggaagtggggacgagttggcaatgataaaattggaggaatgaaatttgaatggatg
tcaaaatcagatgcaattcagcaatttaaacatatatttcttgagaagacagggaatccg
tgggaagcatgggaacagaagattaacttccagaagcaacctggaagattttacccacta
gatattgattatggtgtcaaacaagctccaaaaaagaatccatctaacctgaaaagccag
cttgaacctcggttgttcgaattaatgaaaatgctttttaatgttgaaacctataggtct
gcaatgttagaatttgagatcaatttgtctgaaatgccactcggaaagctaagcaaggag
aatattcaaaaaggatttgcagcattaacagagatacagaactcgatttgcaacactaca
tatgctccagctgttaaagaaagcttgattgttgatgctagcaatcgattttttaccttt
atcccctccgtccatcctcatctgatacaacatgaagatgacatcaaggcaaaggtgaaa
atgcttgaagctctaaaagacattgaaatcgcttcccgactggtgggttttgatagagac
gatgatatgtctcttgatgaaaaatatgagaaacttcaatgtggtattactccattgtca
catgatagtgaagactatcagcttgtcaagaaatatcttcttaatacccatgctccaact
cacaaggattggtccctcgaacttgaagaagtttttgtacttgaaagagaaggagagtgt
gataagtttgcaccatttaaagatatgaaaaataagatgctgctgtggcatggttcacgt
ttgacaaactttgtgggaattcttagccaaggactgagaattgcacctccagaagctcca
acaactggctacatgtttggcaaaggtatttactttgctgacctagtaagtaagagtgca
caatattgctatgtggacaagaatgatcctgtaggtttaatgcttctcagtgaagttgct
ttgggagagatccacgagctcaagaaggctacgtatatggataagccaccaaaagggaaa
cattcaactaaaggattgggaaagacggtgccactgcagtctgagtttgagatgtggagg
gatcaagtagttgtgccctgtggcaagcctgtttcatcaaccatcctagcatcagagtta
ctttacaatgagtacatcgtttataatatggctcaggtcaagatgcagtttttattgaaa
gttcggtttcatcacaaaaggtga
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integrated database retrieval system
