Zingiber officinale (ginger): 122047540
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Entry
122047540 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122047540
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122047540
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122047540
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122047540
03036 Chromosome and associated proteins [BR:
zof03036
]
122047540
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122047540
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122047540
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122047540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
122047540
NCBI-ProteinID:
XP_042464832
LinkDB
All DBs
Position
2B:143401395..143406216
Genome browser
AA seq
546 aa
AA seq
DB search
MQKYIPSLGFWFRQLISRDLNFYISWFLSFSCMPQSMIKQILRRLTRRQSKSGDKRDLVS
GASPPSSITSTSSLDGDLSSTRITILPPGQDSELIYLTQQAHAGVRNCGMTIMPYEALPS
FKDVPSSDRQSLLIKKLNLCHVIFDFTDSTKNLKEKEIKRQTLQDLVDYVTSATEKFPEN
VMQEIIMMVYVNLFRTLISPSSECKVPQAVDLEDDEPVMDPAWLHLHLVYDFFLNFLQSP
ETDAKLAKRYIDHSFVLKLINLFDSEDFREREYLKMILHRIYGRFMVYRPFIRKAINNIF
YQFIFETEKHNGIAELLEVLESIINGFALPLKEEHKLFLVRALIPLHKPKCMGIYHQQLS
HCITQFIVKDCKLADNVIRGLLKFWPITNSSKEVVFLGELEEVLDATQPPEFQRCMVPLF
HQIARCLNSPHFQVAERALFLWNNDHIENLIKQNVKVLLPIIFPALERNTRSHWNPAVQS
LMTYARKVFADNDPDFFAECLKKFEEDDIRSKEIQSKREMTWRRLEEIAATKAASNEPVL
IPHIVH
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaatatatcccttcgttagggttttggttcaggcagttgataagcagggacttg
aatttttatatatcctggtttttgtccttttcatgcatgcctcaaagcatgattaagcaa
attttgcgtcggctcactcgccggcagtccaaatcaggtgataaacgagatttggtcagc
ggtgctagtccaccatcgtcgataacttcgaccagttcactagatggggatttgtcaagc
accaggatcacaattctccctcctggtcaggattctgagctaatttatctaactcagcag
gcccatgctggagtacgaaattgtggtatgaccatcatgccttatgaagcattaccgagc
ttcaaagatgtgccgagctctgataggcagagtttactcatcaaaaaactgaatttgtgt
catgtgatatttgatttcacggactccacgaagaacttgaaagagaaggaaataaaaagg
cagactttacaagatctagttgattatgtgacatcagccactgaaaagtttccagagaat
gttatgcaggagatcatcatgatggtatatgtaaacttgtttaggaccctcatttcccca
tctagcgagtgcaaggttccacaagctgttgatttggaggatgatgaacctgtaatggat
cctgcatggctacacctccatcttgtttatgacttctttttgaacttccttcaatcacct
gagacagatgctaagctggcaaaaagatatattgaccactcctttgttcttaagctgatc
aacctatttgactctgaggattttagagagagggagtatttaaagatgattcttcaccgt
atctatggaagatttatggtgtatcgtccatttataagaaaagctattaataatattttc
tatcaatttatctttgagactgaaaaacataatgggattgcagagctgttggaggtgctg
gaaagtattatcaatgggtttgctttgcctctaaaggaagagcataaattgttccttgtt
cgggctttgatcccactacataaaccaaaatgcatgggaatataccatcagcaattatca
cactgcataacacaatttatagtaaaagattgcaagcttgcagataatgtcataaggggt
ttgttgaaattttggcccatcaccaacagctcaaaggaagttgtgttcttaggagagtta
gaagaggtattggatgcaactcaacctccagagttccagcggtgtatggtgccactattc
catcagatagcccgctgcttaaatagtcctcattttcaggtggccgagagggcgttgttc
ctgtggaacaacgatcacatcgagaacctgatcaaacaaaatgtcaaggtactactgccc
ataatctttccggcacttgaaagaaacacaagaagtcactggaacccagctgtacagagc
ttgatgacatatgcccgaaaggtttttgctgataatgatcctgacttcttcgccgagtgc
ttgaagaagttcgaggaagatgatatcagaagcaaggagatccagtcaaagcgcgaaatg
acatggagacgtttggaagaaattgctgctacaaaagctgcgagtaatgaacctgtgctt
attccccacatagtacattga
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