Zingiber officinale (ginger): 122047648
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Entry
122047648 CDS
T08725
Name
(RefSeq) cysteine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122047648
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122047648
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122047648
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
122047648
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class I (G)
122047648
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122047648
Prokaryotic type
122047648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
DALR_2
T3SS_LEE_assoc
ER
Motif
Other DBs
NCBI-GeneID:
122047648
NCBI-ProteinID:
XP_042464995
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All DBs
Position
2B:complement(145267393..145272690)
Genome browser
AA seq
511 aa
AA seq
DB search
MGSHALVLFNSMSKQKEVFKPLVEGQVSMYVCGVTPYDYSHIGHARAYVAFDVLYRYLKH
LGYDVKYVRNFTDIDDKIIKRANESGEDPLSLSGRFSEAFLHDTAELNCVPPTHQPRVSD
HIEQIKDLITKIMENGCAYTIEGDVYFAIDNFPDYCQLSGRKLDDNRAGGGGRVTVDLRK
KNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSSQYLGTTFDIHGGGKDLIFPHH
ENELAQSKAACPEFKISHWMHNGFVNKDNQKMSKSDNNFFTIRDIIAKYHPLALRFFLMR
THYRADVNYSDIALENASDRVFYIYQTLDDCKQGLSRFREEELKGQTPAKVKESIDKFHS
SFIESMSDDLHTTAVLDDLMEPLKAINSNLKQLKGKKPPKPVILSLLALEKEVRDVLDIL
GLLGASCSEILQQLKDKALVRAELTEEQVQQLIEERNLARKNKEYAISDKIRKELSGKGI
ALMDEANGIMWRPCEPENDATELASNCSIES
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggggagtcacgcgctggtgctcttcaattcaatgtcgaagcagaaggaggtgttcaag
cctctcgtcgaagggcaagtctccatgtacgtctgcggcgtcacgccgtacgattacagc
catattggccatgctcgcgcttacgtcgcttttgacgttctctacaggtatttgaaacac
ttaggttatgacgtcaaatatgtgcgtaacttcactgacattgatgacaagataattaaa
agagcaaatgaatcgggggaggatccattaagtttgagcggtaggttttccgaagcattt
ttgcatgatacagctgaactcaactgtgtgcctccaactcatcaaccacgtgtttctgat
cacatagaacagataaaggatttgataaccaagataatggagaatggatgtgcttatact
atagaaggagatgtttactttgcaattgataatttccctgattattgccaactatctgga
cgaaagcttgatgataatcgtgctggtggaggtggaagagttaccgttgatttaagaaag
aaaaatccagcagattttgctctatggaaggccgctaagcctggtgagccaagctgggat
agtccttggggtcctggcagaccgggttggcatatcgaatgcagtgccatgagttcacaa
tatttaggtactactttcgatattcatggtggaggaaaggatttgatttttcctcatcat
gagaatgaactcgcccagagcaaagctgcatgccccgaattcaaaataagccattggatg
cataatggctttgtgaacaaggataatcagaaaatgtcaaagtcagataacaatttcttt
actattcgagatattattgccaaataccatccactggctttgaggtttttcttgatgcgc
acacattaccgtgccgatgtaaattactctgatatagcacttgaaaatgcatcagatcga
gtcttctatatttatcagacacttgatgactgcaagcagggtctttctcgattccgtgaa
gaggaactcaaaggccaaaccccagctaaggtcaaggaatcaatcgataaattccattca
agtttcatagaatctatgtcagatgatcttcacactactgctgtattagatgatcttatg
gaaccacttaaggcgataaatagtaacttgaagcagttaaagggtaagaaaccgccgaag
ccggttattctttctcttcttgcactagagaaagaagtcagagatgttcttgacattctg
ggactcttgggtgcttcatgctctgagattcttcagcaattaaaagataaagctctggtt
agagctgagttaaccgaggaacaagtacagcagctgatcgaggaaaggaatttagcgagg
aaaaacaaggagtatgcgatctcggacaagatcagaaaagagctttctggtaagggcatt
gctctaatggatgaagcaaatgggataatgtggagaccgtgcgagccagagaatgatgca
accgaattggcctctaattgcagtatcgaaagctga
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