Zingiber officinale (ginger): 122047772
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Entry
122047772 CDS
T08725
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00270
Cysteine and methionine metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122047772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122047772
03032 DNA replication proteins [BR:
zof03032
]
122047772
03036 Chromosome and associated proteins [BR:
zof03036
]
122047772
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
zof02048
]
122047772
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
122047772
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122047772
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
122047772
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122047772
Prokaryotic defense system [BR:
zof02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
122047772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Chromo
BAH
Motif
Other DBs
NCBI-GeneID:
122047772
NCBI-ProteinID:
XP_042465174
LinkDB
All DBs
Position
2B:complement(148775913..148783461)
Genome browser
AA seq
1309 aa
AA seq
DB search
MRRPTQTGHGRIPKFISKFKQLPGFRLPLFCHLKISPRTRAHSRHPVPASHGRALQNPRQ
LPSSPILLRSPAQFSTSQLSDMTTASAEKRTRRMQRAAEVDGGSATPPTTIRGKKRATDT
DSGWATGLEVSKKSAAEASAVGVVNGISPAPPNTRGKKRATETASAVGVVNGVSPAPPNT
RGKNRATETASAVAVVNGVSPASPNTRGKNRATETASAVGVVNGVSPAPPNTRGKNRATE
TASAVGVVNGVSPAPPNTGGKNRATETASAVGVVNGVSPAPPNTRGKNRATETASAVGVV
NGVSPAPPNTRGKKRATETDSGRATGLGVSKKSAAEASAVGVVNGVSPAPPNTRGKKRAT
EAASAVGVVNGVSPAPPNTRGKKRATETDSGRAMGLEVSKKSATEASAAGGVNGVSPASP
NTRGKKRATNTNGPAKDAAGVKKRTKETSLVVEGSNGVALAALVPDQSVKDEDLDNDGYY
VGSDLGSQQSGKHEMEEKGQNEVMSIKISPKKKVGHSKKSKEGAVLGCHFVGDPIPEAEA
KKRWPERYQRKIYASGSAKRVDGESVLLARQHYSQAIVDGVNYNLYDDAYVEAGEGEADY
IGRIVEFFEAIDKQQYFTAQWFFRAEDTVIKEHAHSHGSKVMHDSRRVFLSEEKNDNVLE
CIVSKLQIQRVTPNIDLQAKVKSIPPCDLYYDMSYSLAYSTFTNLPESIRIDNDSSSTIS
SEDAPNSSNKKALSDSEATSSDQKNVITLLDLYSGCGAMSTGLCLGANLSGINLQTCWAV
DLNEYACQSLKLNHPETEVRNEKADDFLALLIEWEKLCTNYCVLRNQSLNEEESDSNDSD
DEFEDSNPPNGEEFEVEKLVGICYGDPNNIGKVGIKFKVRWKGYNSSHDTWEPIDGLSNC
QERIMEFVKKGYKKNILPLPGQVDVICGGPPCQGISGFNRFRNKNAPLDDPKNQQMLVFM
DIVEFLKPKYVLMENVVDILKFANGFLGRYALSRLVAMNYQARLGMMVAGCYGLPQFRMR
AFLWGARPTEILPQYPLPTHDVVDRGGAPNEFEQNIVAYDEDQHPQLEKKLLLEDAISDL
PEIGNYEDRDEMPNDRPPITEFQKFIRLPKIDLCGCAQALASGSIVDRPIAKHQFFDHRP
LQLNDDDYQRVCAIPKKKGANFRDLPGVKVGKDNTVEWDPDVERVFLPSGKPLVPDYAMT
FVRGKSSKPFGRLWWDETVPTVVTRAEPHNQVILHPEQDRVLSIRENARLQGFPDYYQLR
GTVKERYTQVGNAVAVPVARALGYALGQAYQGHSNGVPLLTLPRHFLLQ
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcccaacccaaactggtcatggacggatcccaaaattcatttcaaaattcaaa
cagcttccaggattccgtttgccgctcttttgtcacctcaaaatttcacctcggactcgg
gcacattctaggcatcccgtccccgcgtcgcacggtcgcgccctgcaaaaccctagacag
ctcccctcttctccgatccttctgcgctcgcccgcgcagttctccacctctcaactttcc
gatatgaccacggcgtcggcggagaagcgcacgcggcggatgcagcgggccgccgaggtc
gacggcggcagcgcgacgcctcccaccaccatcagaggaaagaagcgggcgactgatact
gacagtggttgggcgacgggtttagaagtaagtaagaagagcgcggcagaggcatcggca
gtcggagtggtgaatgggatatctcccgcgcctcccaacaccagaggaaagaagcgcgcg
actgagactgcttcggcggtcggagtggtgaatggggtatctccggcgcctcccaacacc
agaggaaagaatcgcgcgactgagactgcatcggcggtcgcagtggtgaatggggtatcc
ccggcgtctcccaacaccagaggaaagaatcgcgcgactgagactgcatcggcggtcgga
gtggtgaatggggtatctccggcgcctcccaacaccagaggaaagaatcgcgcgactgag
actgcatcggcggtcggagtggtgaatggggtatccccagcgcctcccaacaccggagga
aagaatcgcgcgactgagactgcatcggcggtcggagtggtgaatggggtatccccagcg
cctcccaacaccagaggaaagaatcgagcaactgagactgcatcggctgtcggagtggtg
aatggcgtatccccggcgcctcccaacaccagaggaaagaagcgcgcgactgagactgac
agtggtagggcgacgggtttaggagtaagtaagaagagcgcggcagaggcatcggcggtc
ggagtggtgaatggggtatccccagcgcctcccaacaccagaggaaagaagcgtgcgact
gaggctgcatcggcggtcggagtggtgaatggcgtatccccggcgcctcccaacaccaga
ggaaagaagcgcgcgactgagactgacagtggtagggcgatgggtttggaagtaagcaag
aagagcgcgacagaggcatcggcggccggaggggtgaatggggtatccccggcgtctccc
aataccagaggaaagaagcgcgcgacgaatacgaacggccctgccaaggatgcagctgga
gttaagaaacgaacgaaggagacatctttggtggtcgaagggtcaaatggcgtagcgctg
gcggctctggtacctgatcaatcagtcaaggacgaggatcttgacaatgatggatattat
gtcggtagcgatctaggatctcagcaatctggaaaacacgaaatggaagaaaaaggacaa
aatgaagtgatgagcatcaagatatcgccaaagaagaaggtgggacatagcaaaaagtcc
aaggaaggtgcagttcttggttgtcactttgttggtgatcctattccagaggccgaagct
aaaaaacgttggccagaaagataccagaggaaaatttatgcttctggaagtgctaaaagg
gtggatggtgaatcagtattgctagcgaggcagcattattcacaggccatagtggatgga
gttaattacaatctttatgacgatgcctacgttgaagcaggtgaaggagaggctgattat
attgggcgtatagttgagttttttgaagcgattgataagcaacaatatttcacagctcag
tggttctttagagcagaagacactgttataaaagagcatgctcattcccatggttcaaaa
gtgatgcatgattcaaggagagttttcttgtctgaagagaaaaatgacaatgtcttggag
tgcattgtctccaaactacaaattcaacgagtgactccaaatattgatttgcaagccaag
gtgaaaagcatccctccttgtgatctttattatgacatgtcatattctttggcatattct
acatttactaatttgcctgaaagtataaggattgacaatgattcttcatccactatttct
tcagaagatgctcctaattcttcaaataaaaaagcattatcagattctgaagctacatct
tctgatcaaaagaatgtgatcactttgcttgatctctattcaggttgtggagctatgtcc
actggtttatgcttgggtgccaatttgtctggcataaatctccaaacatgttgggcagtt
gatttaaatgaatatgcatgtcagagtttaaagttgaatcacccagagactgaggtgaga
aatgaaaaggctgatgattttctagctcttttgattgaatgggagaaactatgtacaaat
tattgtgtactcagaaatcaaagtttgaatgaagaagaaagtgattcaaatgattcggat
gatgagtttgaagattctaatcctccaaatggtgaagaatttgaggttgaaaaattagtt
ggtatttgctatggtgatccgaataacattggaaaagttggaataaagtttaaggttcgt
tggaaaggatataatagtagccatgatacatgggagccaattgacggcctaagcaattgc
caagagagaattatggagtttgtgaagaagggatacaaaaaaaatattttaccattacct
ggccaagtggatgtgatttgtggcggtcctccttgtcaaggaataagtggatttaatcgt
tttagaaataagaatgctccattggatgatccaaagaatcaacaaatgcttgtttttatg
gatatcgtagagttcttgaagccaaaatatgtccttatggagaatgttgttgacatactc
aaatttgccaatggctttttgggaagatatgcattgagtaggttggttgctatgaactat
caggcaaggcttgggatgatggttgctggatgttatggactgcctcaatttcgaatgcgt
gcgttcctttggggtgctcgcccaactgagattttgcctcagtatccattaccgactcat
gatgtggtggatcgtgggggtgcacctaatgagtttgagcaaaacattgttgcatatgat
gaagaccaacatccacaacttgagaagaaactactcttagaggatgctatatctgatctc
ccggagattggtaattacgaagacagggatgaaatgcctaacgacaggcctccaataaca
gagtttcagaagtttattcgccttccaaagattgatttatgtggatgtgcacaagcttta
gcatccggatctattgtggatagaccgattgcaaagcaccagttttttgatcacagacca
ctgcaattaaatgacgatgattatcaacgtgtttgtgcaattcctaagaaaaagggcgca
aacttcagagatttgccaggagttaaagtcggtaaggataatacagttgagtgggatcca
gatgtcgagagagtttttttgccatctgggaaacctctggttcctgattatgcaatgact
ttcgtcagagggaaatcctcaaagccttttggacgactttggtgggatgaaacggttccc
accgtcgtaacaagagctgaacctcacaaccaggtgattctgcatccggagcaggatagg
gtgctttcaattcgtgagaatgctaggcttcaaggcttcccagattattatcaacttcga
gggactgtaaaagaacgatacactcaagtgggaaatgctgttgctgttccagtcgcaaga
gcattaggttacgcactgggtcaagcgtaccagggtcatagcaatggtgtgcctctcctt
acgcttcctcgtcactttctgctgcaatag
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integrated database retrieval system
