Zingiber officinale (ginger): 122048080
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Entry
122048080 CDS
T08725
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122048080
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122048080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
KH_KRR1_1st
Motif
Other DBs
NCBI-GeneID:
122048080
NCBI-ProteinID:
XP_042465622
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Position
1B:5747631..5753088
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AA seq
374 aa
AA seq
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MATDNPFDLLGDNDHDDPSQFIVAHQKVAAAKKPAAVAATTPAVAKLPTKPLPPSQAVRE
SREVRNNDAPVRGGAGRGGLGRGRGGRGPNREFGNDYANGFSRNYGGVGGEDGDTDKPEK
ERPTRQPFGGGRRGGYGGRGGYGNDESGGDSERPPRRLYERRSGTGRGYEVKRLGAGRGN
WGTVADESLEQEKEDVLKSDEKPTEGRQEQENTSLTEESKDKEGAANEAEEKEEDKEMTL
EEYEKIKEEKRKALLALKAEERKVEIDKELQSMQLLTTKKEIDPIFVRLGSDKEASKKKE
NNDNDERSKKPLNINEFFKTGEGKQYYSAASRGRGRGRGDRAPFRSGYGGRGSSFAAAAP
SIEDPGQFPTLGVK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgataatcccttcgatctactgggagacaacgaccacgatgatccctcgcag
ttcatcgtcgctcatcagaaggtggcggcggccaaaaaacccgctgcggtagccgccact
actccggcagtggcgaagctaccaacgaaaccgcttcccccttctcaagctgtgagggaa
tcgagggaagtcaggaataatgatgccccggtacgtggtggtgctggccgtggcgggctt
ggacgcggaagaggtggacgaggcccaaatcgtgagtttggaaatgattatgcgaatggg
ttttctaggaactacggcggtgttggaggcgaagatggtgatactgacaaacccgaaaag
gaacgcccaacacgtcagccatttggcggtggtcgtcgtggtggatatgggggccgtggt
ggttatggtaatgatgaatctggaggtgattctgaacgacctccacgcaggttgtatgag
cgtcgcagtggtactggtcgtggttatgaggtgaaacgtctaggtgcaggtcgtggtaac
tggggaaccgtagctgatgagtcactggagcaggaaaaggaggatgttctcaagtctgat
gagaaaccaactgaggggcgtcaagaacaggaaaacacatcattaaccgaggagagcaag
gataaggagggtgctgctaatgaggctgaagaaaaggaagaggacaaggagatgacttta
gaagaatatgagaaaatcaaagaggagaaaagaaaagccttacttgcattgaaagctgag
gagaggaaggttgaaatcgacaaggagttgcaatccatgcaactactaacaacaaagaaa
gaaatcgaccctatttttgttagattgggttctgacaaggaggcaagcaaaaagaaagaa
aataatgacaacgacgaacggagcaaaaaacccctgaacatcaatgagttcttcaagacc
ggtgaaggtaaacaatactacagtgctgctagccgtggacgtggccgaggaagaggtgac
cgtgcaccattcagaagtggttatggcggccgaggttcaagctttgcagctgctgctcca
tcaattgaagatcccggccagtttcctactcttggcgtgaagtag
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