Zingiber officinale (ginger): 122048481
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Entry
122048481 CDS
T08725
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7 isoform X1
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122048481
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122048481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
ANAPC4_WD40
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF4
WD40_Gbeta
Beta-prop_EIPR1
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
122048481
NCBI-ProteinID:
XP_042465981
LinkDB
All DBs
Position
1B:complement(7227731..7233535)
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AA seq
519 aa
AA seq
DB search
MISATQQKIADELDVRARKYLRGDGANLETLRDKKLKGQLVNREKLYGQSAKAAAKAEKW
LLPSDEGYLEPEGLEKTWMIKQESIVREVDISSFRKPFDMILPDLGPYKLEYTPSGRYMV
MGGRKGHLAMIDMLNMNLIKEFQVRETVRDVVFLQNEQFFAVAQKKYPYIYNWRGTEIHC
LKEHGAALKLQFLDKHFLLASVNKSAQLHYQDVSTGVIVANYRTGLGRTDVMQVNPYNAV
IGLGHSAGKVTMWKPTSAKPLVTMLCHFGPVTDIAFHKGGHLMATTGMDHKIKLWDIRKF
GLLHSYTAHAQMLDFSQKGMLALGNKSHVHIWRDSGNQDYKQYMSHEMVKGYQLAKVCFR
PYEDVLGIGHSMGLSSIIVPGAGEPNFDSWVANPYETKKQRREKEVHALIDKLQPETIML
EPTKIGTLKPRRTKANPTKKEIQEEMESAIDAAKNITFKKKTKGRNKPSKRTKKKEEGVF
KAKRPFLEQKTEERPFKRQKKEEVELPKALQRFSRKKAQ
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgcaacacaacagaagatcgccgatgagttggatgtgagagcaagaaaatat
ttgcgtggtgatggtgctaatttggagacgttacgagacaagaaactgaaaggtcagctt
gtcaatagggaaaaattatatggacagtcagcaaaagctgctgctaaggcagaaaagtgg
ttgttgcctagcgacgaaggctatttggagcctgaaggtttagaaaagacatggatgatc
aaacaagagtccatagttcgcgaagtggatatttcaagtttcagaaagccatttgatatg
atcttacctgatttaggtccatataaactggaatacacgccaagtgggcgttatatggtg
atgggaggccgtaaaggccacctggcaatgatagatatgttaaacatgaatttaatcaaa
gagtttcaggtccgagagactgttcgagatgttgtgttcttgcaaaatgagcagtttttt
gcagttgctcagaaaaagtatccctacatatacaattggagaggaacagagatccattgt
ttaaaggagcatggtgcagctttaaagcttcaatttctagacaaacatttcctcctggct
tcagtgaacaaatctgctcaactccattaccaagatgtgagcacaggtgtcatagtcgcc
aattaccgaactggtctaggccgaactgatgtgatgcaagtcaatccttataatgccgtt
attggtttgggccattcagctggcaaagtcaccatgtggaagccgactagtgcaaagccc
ctggttactatgctttgtcattttggccctgtcactgacattgccttccacaagggaggt
catctaatggccacaactggcatggatcacaagatcaagttatgggacatcaggaagttt
ggcctactccattcatatactgcgcatgctcagatgctggattttagtcagaagggcatg
ctcgcgctaggaaataaatctcatgttcatatctggagagactcagggaatcaagactat
aaacaatatatgagccatgaaatggtcaaaggatatcaactagcaaaagtctgttttcga
ccatatgaagatgttctgggtattggccactccatgggtttgtcttccataattgttccc
ggagctggtgagcctaactttgattcatgggttgcgaacccttatgaaactaaaaaacag
aggagggagaaggaagttcatgccctcatcgataagcttcagccggagacaatcatgttg
gagccaactaaaattggtactctcaagccacgaaggaccaaagcaaatccaaccaagaag
gaaattcaagaggaaatggaatctgcaattgacgcagccaaaaacattaccttcaagaag
aagaccaaaggtaggaataagccgagcaagaggaccaagaaaaaggaggaaggggttttt
aaggcgaagagacccttcttggagcaaaaaactgaggagagaccgtttaagagacagaag
aaggaagaggttgaattgcctaaagctttgcagcggttttctcggaagaaggcacagtag
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integrated database retrieval system
