Zingiber officinale (ginger): 122048652
Help
Entry
122048652 CDS
T08725
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00531
Glycosaminoglycan degradation
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122048652
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zof00536
]
122048652
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
122048652
Glycosaminoglycan binding proteins [BR:
zof00536
]
Heparan sulfate / Heparin
Enzymes
122048652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
122048652
NCBI-ProteinID:
XP_042466127
LinkDB
All DBs
Position
2B:complement(124834858..124837174)
Genome browser
AA seq
511 aa
AA seq
DB search
MINQHFFLPIFLIFIVPTLSPEVANVMITMNGSNLAAETSNNFICATLDWWPPEKCNYDQ
CPWGESSILNLNLSHPFLAKAIQAFNPLRVRLGGTLQDKVVYGMPNLEQPCLPFSKRVGD
LFDFSEACLSMTRWDELNHLFQKTRAVIIFGLNALYGRNHIQINKWTGAWNSTNARDFIS
YSISKGYNVDTWEFGNELSGQGVGASVDAEQYAKDLMVLKAMLKELYNDSHQQPLLVAPG
GFFDPQWYAQLLQDSGPGTLDAMTHHIYNLGGGDDPHIQAKIMDPEYLSSTMIDTFRTLQ
LTIETNGPWSSAWVGEAGGSYNSGNRVVSNKFLNSFWYLDQLGMASKYNTKVYCRQTLIG
GNYGLLDLNTLVPNPDYYSALLWHRLMGKGVLDIEVSGSPYLRAYGHCRKKRSGISMLLI
NLSNSTKFSVTILDDSSKTLKHRKEYHLTAKDDNYLSQTMLLNGTPLELTEEGGLPPLKP
LNVLVESPIEVAPLSIAFIVFPNIKVGACMS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgattaatcaacattttttcttgcctatctttctcatcttcattgttccaactttatct
ccagaagttgccaatgtaatgatcactatgaatggatctaatttagcagctgaaaccagc
aataattttatttgtgcaactctcgattggtggcctcccgagaagtgcaattatgatcaa
tgtccatggggagaatcttcaatcctgaacttaaacttgagtcatccatttcttgccaaa
gccattcaagcattcaatcctttgcgagtaagactgggaggcacactacaagataaagtt
gtgtatggcatgccaaatttggagcaaccatgccttcccttttccaagagggttggtgat
ttattcgatttttctgaagcttgtttgagcatgacaaggtgggatgagctaaaccatcta
tttcaaaagacaagagctgttattatatttggtctaaatgccctatatgggagaaatcac
atacaaattaataagtggaccggagcatggaactccaccaacgcccgagacttcatcagc
tactccatatcaaaaggatacaatgtcgatacatgggaatttggcaatgagttgagtggg
cagggagtgggagctagtgtagacgctgagcaatatgccaaagatttgatggtgcttaaa
gctatgctaaaggagttgtacaatgattcacatcaacaaccattactagttgctccgggt
ggcttcttcgatccacaatggtatgctcagctccttcaagactcaggtcccggaactctt
gatgccatgacacatcatatttacaatctaggtggaggtgatgatcctcacatacaagct
aagattatggatcctgaatacttaagtagtactatgattgatacatttagaactctccaa
ctcactatagagacgaatggaccctggtcttctgcttgggttggtgaagctggaggctca
tacaacagcggcaatcgtgttgtgtcaaacaaattccttaacagtttttggtaccttgat
caactcggcatggcttcaaagtacaacaccaaggtttattgtcggcaaacattaatcgga
gggaattacggccttcttgatttgaacactttggtaccaaatcctgattactatagtgct
ctgttgtggcatcggctaatggggaagggagttcttgatatcgaagttagtggttcgcca
tacttgagagcttatggccattgcagaaagaaaaggtccggcatctctatgttgttgatc
aacttaagcaactcaaccaagttcagtgtgactatccttgacgatagtagcaaaacatta
aaacatagaaaagaatatcatctcacagcaaaagatgacaactatttaagccaaactatg
ttgttgaatggtacgccgttagagctcaccgaagagggaggccttccgccattgaaacct
ttgaatgttctagtcgagtcacctatcgaagtggctcccttatcgattgcgtttattgtt
tttcctaacattaaagtgggagcttgtatgagttaa
DBGET
integrated database retrieval system
