Zingiber officinale (ginger): 122048721
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Entry
122048721 CDS
T08725
Name
(RefSeq) protein TRANSPARENT TESTA 9-like
KO
K19513
protein CLEC16A
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122048721
03029 Mitochondrial biogenesis [BR:
zof03029
]
122048721
Membrane trafficking [BR:
zof04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122048721
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
122048721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FPL
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
122048721
NCBI-ProteinID:
XP_042466189
LinkDB
All DBs
Position
2B:131943938..131971026
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AA seq
854 aa
AA seq
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MFSWFGLWRSRNRFSLDELQYLTDQLQRVQYVNDANKDSVIEVLRSIAELVTYGDQHDPS
IFEFFMEKQILGEFARILRISKMAKVAIQLLQTISIMIQNLESEPSIYYIFSNELISYLI
TYSFDFQNDELLSYYISFIRAISGKLNRSAISLLVKIKNEEIVSFPLYVEAIRFAFHDEN
MIRIAVHALTLNVYHVGDEYVNKFVVRSPQSDYFSSIVRHFLKRCINLDEIIVQASRKLD
ASDSSSSILNAVDDIEDDLYYFSDVISSGVPDLGRLLTDNILQLLVFPFLLPSLRKQNSG
TRIRIATSLHLLCSILHIFKTKDLASTIAAAFFCPIEAFVTISEATINGSDTDQYVRQDS
QELGACHWAAQVDIENSESPSPNSSQSSSAIENSGSYFTLRELLLSYIIHGDELQVLGSL
CLLATLLQTKELDESVLDGLGILPQRKQHKKLLLQALVGEDNGEEQLFSSTCMPKDNRST
ELESFLLKLEDEYGYHAKCNVNPKMHRYQVLDALVSLFFRSNISAEILWLGGWLLRQLIP
HGEGEFASPHLSRLKDSHKLYTSNLFEEVKGAWCDALIFVLQDTWKICKRGNCLPYHKLL
DCHLLAYIGFMIYFLILLINLNFTCFNSDPLCIYVYSCNSISGESSLGAAERMCKMVKVF
VLLRQLLVFSLGGTLSDLPNIQSSLVSLEISRAKTSGLDAVVPNPGSEICLVDAIPCRIA
FERGKERHFCLLAISRGTSGWILLAQESPIRQQGGIVRVAAPLSSSDPKIDEKHPKWLHL
RIRPSTLPFLDPARSDSFNKGKTKNLIDGRWTLAFNDEEACKAAEAMLVEEINLQRSEVE
RRLIRLLYADTTID
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtggtttggcctatggagatccaggaaccgcttctcgctagacgagctccaa
tatctaacagatcagttgcaaagggttcaatatgtgaatgatgctaacaaggattctgtt
atcgaagtgttgagatctattgctgaactggtaacttatggtgatcaacatgatccatca
atatttgagttcttcatggagaagcagattttgggtgaatttgcacgaatattgcggatt
agcaagatggcaaaggttgcaattcagttgttacagactatcagcattatgatacagaat
ttagaaagtgaaccttcaatctattacattttcagtaacgaactcattagttacctcatc
acatattcctttgactttcaaaatgatgaactattgtcttactacatatccttcataagg
gcaatcagtgggaagttgaacaggagtgcaatctcattgcttgtgaagattaaaaatgaa
gaaattgtttcgtttccactttatgtcgaggccatacggttcgccttccatgatgaaaat
atgattcgaattgctgttcatgctttaacactgaatgtctatcatgttggagatgaatat
gtgaataaattcgtagtacgcagcccacaatctgattatttttccagtattgtgagacac
tttttaaagcgatgtattaacttggatgagattatagttcaagcttctaggaagttagat
gcatctgattcaagttcttcaattctcaatgctgtagatgatattgaagacgatctttat
tattttagtgatgttatatcttcaggagttcctgatcttggaagattgcttactgataat
atattgcagcttttagtttttccttttcttctgccctctttaagaaagcaaaattctggc
acaagaattcgcattgcaacctccttacatctactttgcagtatattacacatttttaag
accaaggatctggccagtactattgctgcagcttttttctgtcctatagaggcttttgtc
acaatatctgaagccacaataaatggcagtgatactgatcaatatgttcgtcaggattca
caagagcttggtgcttgtcattgggctgctcaagtggatatagaaaattcagaatctcct
tctcctaattcaagtcaatcttcttcagcaatcgaaaattctggttcatattttacattg
agggagctattgctatcatatataattcatggggatgagttgcaagttttgggctcatta
tgtcttctggctaccttgctgcagacaaaagaattagatgaatcagtgctggatgggctt
ggaattcttcctcaaagaaagcaacacaagaagctgctgcttcaagctttggttggtgaa
gacaatggggaggagcaattgttttcttcaacctgcatgccaaaagataataggagcact
gaacttgagagtttcctgctaaaacttgaggatgagtatgggtatcatgccaaatgcaac
gtaaaccccaaaatgcatagatatcaggtacttgatgcattagtaagtcttttcttccgg
tccaatatatctgcagagatactatggcttggtggttggctcttaaggcagcttattcct
catggcgagggagaatttgcttctcctcatcttagccgactcaaggattcacacaagttg
tatacaagcaatctttttgaggaagttaagggagcttggtgcgatgcactcatatttgtc
cttcaagacacatggaaaatatgcaaacgaggtaattgtctgccctaccataaattgctc
gattgtcatttgctggcatatattggattcatgatttatttcctcatcttactaatcaat
ttaaatttcacttgttttaattctgatccgctttgcatatatgtttattcatgtaatagc
atttcaggtgaatcctctcttggtgctgctgaaagaatgtgcaagatggtcaaggttttt
gttcttctacgccaacttcttgttttctcgctaggtggaaccttatctgatctacccaat
atacaatcttcactcgtttctctagaaatatccagagccaaaacttcaggtttagatgct
gtagtaccaaaccctggttctgaaatttgcctagttgatgcaataccttgcagaatagca
tttgagagaggcaaagagcgtcacttctgcctcttagcgatatctagaggaacatctggg
tggattcttcttgcccaagaatcacctatcaggcagcaaggtggcattgttcgtgtcgca
gcaccgttgtccagttctgatccaaaaatcgacgaaaaacatccaaagtggttgcatttg
cgcatccgaccttccactttgccatttttggatcctgcaagatctgattctttcaacaaa
gggaaaacaaaaaatttgatcgatggacgatggacactagcatttaacgatgaggaagct
tgcaaagctgcggaggcaatgctcgtggaggagataaatttgcaacgaagcgaggtggaa
agaaggttgattcgtttgctctatgcggatacaacaatcgactga
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