KEGG   Zingiber officinale (ginger): 122048818
Entry
122048818         CDS       T08725                                 
Name
(RefSeq) protein GLE1-like isoform X1
  KO
K18723  nucleoporin GLE1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03013  Nucleocytoplasmic transport
zof03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122048818
   03015 mRNA surveillance pathway
    122048818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122048818
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122048818
SSDB
Motif
Pfam: GLE1
Other DBs
NCBI-GeneID: 122048818
NCBI-ProteinID: XP_042466276
LinkDB
Position
1B:complement(8030415..8048898)
AA seq 628 aa
MKWDPAKGSAINPTHSDYIQLEPPCSKSSLVVASVDPDQQWTMDDFVAGLQALELKLGFS
SSKIPSPLKQFERVLLQESEMHMLDKTRCESDQVVGWRMTCPDFDSSDFEGSVDDLSFET
TKSYAMDKQNLEKSIFLELERQSQLRLKEELRSKLADLVASQRSEINRSASAMTQISKYV
EVKQEMDRKLDKQYQRKIAEMLDSHLSAVQRDHEQRSLIEERRLRDDAAFEEAKKRGLIE
EKHRREKVKAEAEAKLKAAKLAEEAERTTMEAAQRAAKESAETETVSIREAAASEDARKK
STDDDNTNTKDTASLPKMPKEPLLTDGIKVLATDAALKAEIKRLKIYNEVIENPNLPSQK
ELDRRGRQISKILKQLTGTVENVRTKKDALVNILSTDIPGCPSSISAIMFAKQVIAWCED
STGTFDSTVFACGRVILLVTSKIPDVMDFLVAEFHKVCIYTVPKYLQPSDQASQNDDYWK
MIGYHEKDGKIESSESYLNRVQSYMKLYAAIIQTEIEGIRNPHGLGKGWSWLARFLNALP
ANKSTAYALEAFLKMAGFALYRKYKYQFKKMLDVISRSYLPAVRLKEKGDRKIVEVVKKL
EQYLEHEMFRKEPDGWRLHDGLLSKELV
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgaaatgggatcctgcgaagggttctgccatcaaccctacccactcggattacattcag
cttgagccaccatgcagcaagagctctcttgtggttgcttcagttgatcctgatcaacaa
tggacgatggatgattttgtagcagggctccaagcattagagctgaagcttggattttca
tcttctaagataccatcacctctaaagcagtttgaaagagtattactgcaagaaagtgaa
atgcacatgttggataagacgaggtgtgaaagtgaccaggtagttgggtggaggatgact
tgtcctgattttgattcaagtgactttgaaggatctgttgatgatttgtcatttgaaaca
actaaatcttatgccatggacaaacaaaaccttgaaaaaagcatctttttggagcttgaa
cggcagagtcagctaagacttaaggaggaacttaggtccaagttagcggacttggttgca
tctcagagaagtgaaatcaacagatcagcttctgccatgacccagatttcaaaatatgta
gaagtaaaacaggagatggatagaaagctcgacaaacaatatcaaagaaaaattgctgaa
atgcttgatagtcacttgtctgctgttcaaagggatcatgaacaaagatccctaattgaa
gaaaggagattaagggatgatgctgcttttgaagaagccaaaaaaaggggccttattgaa
gaaaaacatcgccgagaaaaagttaaagcagaagctgaggcaaaactgaaggctgcaaaa
ctggctgaagaagcagaaaggacaactatggaggctgctcaaagagcagccaaagaatct
gctgaaacagaaactgtcagtattagggaagctgctgcttctgaagatgcaagaaagaaa
tctacggacgatgataatacaaatacaaaggacacagcttcacttccaaaaatgccaaaa
gagccactgctgacagatgggatcaaggttttggcaactgatgctgcactgaaagcagag
atcaaaagactaaaaatttataatgaagtgattgagaaccccaatcttccttctcagaag
gaacttgatagacgtgggaggcagatctctaaaatcctaaagcaattaactggaactgta
gagaatgtcagaacaaaaaaagatgcacttgttaacattctctcgacggatattccaggc
tgtcccagctccatttctgcaattatgtttgcaaaacaggtgattgcatggtgcgaagac
tcaactggaacttttgacagcactgtttttgcatgtgggcgtgtcattcttttagttaca
tcaaagattccagatgtgatggattttctggtggctgagtttcataaagtttgcatctat
accgttccaaaatatttgcaaccatcagaccaagcatcacagaacgatgactactggaag
atgattggttaccatgaaaaagacggaaaaatcgaaagctccgagagttacctgaaccga
gtccaatcctatatgaagctttatgctgccataattcagacagagattgagggtatcaga
aatcctcatggcttaggaaaaggatggtcgtggcttgcgaggtttctgaatgccttgccc
gcaaacaaatccacggcttatgctttggaagctttcttgaagatggcaggctttgctttg
tacaggaaatacaaatatcaattcaagaagatgcttgatgttatttctcgaagctatttg
cctgcggtcagactcaaggaaaaaggagataggaagattgttgaagtcgtcaaaaaacta
gaacaatatttagaacatgaaatgtttcgaaaggaacctgatggatggcgtctccatgat
ggcttgttgtcaaaggagttggtgtaa

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