Zingiber officinale (ginger): 122049544
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Entry
122049544 CDS
T08725
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122049544
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122049544
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
122049544
NCBI-ProteinID:
XP_042466844
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Position
2B:complement(129907765..129910710)
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AA seq
460 aa
AA seq
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MKAPAFSSSPPSPPQQQPGPPSAAVSQSAAPPKKKRNLPGNPNPGAEVIALSPKTLLATS
RFVCQVCGKGFQREQNLQLHRRGHNLPWNLKRKSPDERRRVYLCPEPTCAHHDPSRALGD
LTGVKKHYCRKHGEKRWKCDQCSRRYAVLSDWKAHAKICGTREYRCHCGILFSRRDSYIT
HRAFCDALAQENARLPPATGMSGAAISGHLYANKGVSYLGLPQFNSHLPAAGGSTNTHEQ
SFNVDVPHLDTASFRPLPRSSHGQPYLAGEGRYDDLHGFNFEDPPPLLEGAQFGFGASSS
SGNNYFNKNLNFFPTAGKNEEDQSGGGHLVGPAPGGGNDATAMPLLLASELMGHQAIAGS
NMSMTPSLYDPGPSLPQSSATVTLRKAAQLGATSSFTGGIGGGSLRSNERQYQKTMNSLG
GGEFSSDHLMAAGGFRLAMQPDDVEKEKLSTRNFLASAAP
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaccggccttttcgtcgtcaccgccgtcgccgccgcagcaacagccaggcccg
ccgtcagcggctgtttcacagtccgctgctcctcccaagaagaagaggaacctccctgga
aacccaaatcccggcgcggaggtgatcgcattgtcgcccaaaaccctactggcgaccagc
cgcttcgtctgccaagtgtgcggcaaggggttccagcgggagcagaacctgcagctccac
cggcgcggccacaacctgccgtggaatctgaagcggaagagcccggacgagcggcggcgc
gtgtacctctgccctgagccgacgtgcgcccaccacgacccctcccgagccctcggcgac
ctcaccggcgtcaagaagcactactgccgcaagcacggcgagaagaggtggaaatgcgac
cagtgctccaggcgttacgccgtgctgtcggactggaaggcccacgccaagatctgcggc
acccgcgagtatcgctgccactgcggcatcctcttctccaggagagacagctacatcacc
cacagagccttctgcgatgcactggcgcaagaaaacgcgaggcttcctccagcgaccgga
atgagcggcgccgccatcagcggccacttgtacgcaaacaaaggcgtaagctacctcggc
ctcccgcagttcaactcccatctcccggccgccggaggtagcaccaatacccacgagcaa
tcattcaacgtcgacgtccctcatctcgacaccgcctccttccggccactcccgcgctct
tcccatggtcaaccatacctcgccggcgaaggcaggtacgatgatctccatggattcaac
ttcgaggatcctcctccgttgctcgaaggcgcccaatttggcttcggcgcctcgtcgtcg
tccgggaataattatttcaacaagaacctcaatttcttcccgaccgccggcaagaatgag
gaagatcagagtggcggcggccatctcgtgggaccggcgccgggaggaggcaacgacgcc
accgccatgccattactcctcgccagcgagctaatgggccaccaagcaatcgccggctcc
aacatgtcgatgacgccatcgctctacgaccccggcccgtctttgccgcagtcgtcggcc
accgtgacgctccggaaggctgcccaattgggcgccacgtccagcttcaccggtggtatc
ggtggtggatccctcagaagcaatgagaggcagtaccaaaagaccatgaattcgctgggc
ggcggcgagttctcctccgaccatctaatggctgctggcgggttccgcctggcaatgcaa
ccggacgacgtggagaaggagaaattgagcacaaggaacttcctcgcgtcggcggcacct
tga
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