Zingiber officinale (ginger): 122049637
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Entry
122049637 CDS
T08725
Name
(RefSeq) SKP1-like protein 1B
KO
K03094
S-phase kinase-associated protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122049637
04120 Ubiquitin mediated proteolysis
122049637
09126 Chromosome
03083 Polycomb repressive complex
122049637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122049637
04121 Ubiquitin system [BR:
zof04121
]
122049637
03036 Chromosome and associated proteins [BR:
zof03036
]
122049637
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
122049637
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
122049637
Cul7 complex
122049637
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
122049637
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
122049637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
DUF6324
Motif
Other DBs
NCBI-GeneID:
122049637
NCBI-ProteinID:
XP_042466929
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All DBs
Position
2B:145166306..145168102
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AA seq
159 aa
AA seq
DB search
MDTDKKIILLSSEGDAFEVDTAVAMASQTIKHMIEDRCTEGGIPLPNVTSRILAKVLEYC
KMHVNDYSVLSDDVTKLVPEELTAWDAEFVSVDQETLFSIILAANYLHIQRLLDLACQSV
ANMIRGQTTEEIRKIFNIKNDFDPEEEEEIRKENEWAFM
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggacacggacaagaagatcatcctgttgagctccgagggcgacgcgtttgaggtggac
accgcggtggccatggcgtcgcagaccatcaagcacatgatcgaggacagatgcacagag
ggcgggatccccctccccaacgtcacctccaggatccttgccaaggtccttgagtactgc
aagatgcacgtcaatgactactccgtgctttccgacgacgtcaccaagctcgtccccgaa
gaactcactgcttgggatgccgaattcgttagcgtcgaccaggaaaccctattcagtatt
atcttggctgcaaactacttgcacatccagaggctgctggatctggcatgccaatctgtg
gctaacatgatcaggggccagactactgaagagatccgcaagatattcaacatcaagaac
gacttcgacccggaggaagaggaagagattcgcaaggagaatgagtgggccttcatgtaa
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