Zingiber officinale (ginger): 122050627
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Entry
122050627 CDS
T08725
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122050627
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122050627
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122050627
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122050627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
TOR1L1_N
HEAT_Maestro
Cnd1
UTP20
INTS1_R4
Adaptin_N
TPR_TTI1_C
MMS19_C
Sec7-like_HUS
HEAT_DAAF5
MMS19_N
Dopey_N
Tra1_ring
Glutaredoxin2_C
Arm
PPP2R1A-like_HEAT
Motif
Other DBs
NCBI-GeneID:
122050627
NCBI-ProteinID:
XP_042467456
LinkDB
All DBs
Position
1B:11004379..11024536
Genome browser
AA seq
1432 aa
AA seq
DB search
MEEALEAARAKDTKERMAGVERLLQVLESTTRSLSSAEVTSLVDTCMDLLKDSNFRVSQG
ALQALSAAAVLSGDHLKIHFNGLVPAVVERLGDGKQPVREAARQLLITLMEVSSPTIIVE
RAGSYAWAHRSWRVREEFARTVSTAVGLFASTELPLQRVLLPPVLQLLTDSNQSVREAAA
SCIEEMYAQVGTQFHEELQRHSLPSSMIKEINARLEKIEPKVLPSDGVRSHISTDNRTAS
ASHKKSSPRTKISTRETSFSSGEFDITEKPVVPIKVFTEKELVKEMEKITSTLVPEKDWS
LRISAMQRVEGLVIGGAADYQSFPVLLLKQLAPPICTQLSDRRSSIVKQACHLLNLLSKE
LLGDFEACAEMFIPVLLKLVVITVLVIAESADHCIKTMLRNCKVARILPRIAEIAKSDKS
SVLRARCCDYALLILEYWADAPEIQRAADLYEELIKCCVADAMSEVRSTARTCYRMFTKT
WPERSRRLFLSFDPAIQRLINEEDGSIHKRHASPSIRERGLQLSHSSSQASQAFSTGIPG
YGTSAIVAMDKGATSSVGTSLSSAGLLSQSKTLRKNPERTLESMLDASKQKVSAIESLLK
GVSISGKQSFTSTRSTSLDLGVDAPSTRDPQVPSSVSSNLFPVQGSVLVDSNAANIAKGN
NRNGGSNMSEHLTSQVQLSRDSSRSSYFSPSDTLSALSLSYMKRSERLQEGSGIEDNVDL
KFSRRISSMPIDKQYLETPYKDSFYRESPNSYIPNFQRPLLRKQVTGRAIASSRKSFDDS
QIQGTEIHSYMDGPASLNDALNEGLSASSDWVARVSAFNYLRSLLQQGPKGILEITQHFE
KVMKLFFRYLDDPHHKVAQAAFSTLAEIIPVCRKPFESYLERTLPHVFSRLIDPKELVRQ
PCSTTLEIVSKTYNVDSLLPALVRSLDEQRSPKAKLAVIQFANNSFNKHTINPEGNSNSG
FIKLWLGKLSPWVNDKNVRLKEASISGIISVYTHFDSTAVLNFILNLSVEEQNSLRRALK
QYTPRIEVDLMTFLQNKKERQRSKSFYDQSDVVGSSSEEGYVGGLKKSHQLGRYSAGSLD
DEGGRKWSLGHESTELDASIVHVTSNEIHHSSQNLDEFISDPLLQGTDSGTNCLKKTDYV
IEHESSIPTPRLSINRFIVSDGHKPIDLNHGGEISKGSELKHLKNSPVRANLQGDSGPSI
PQLLHRICNTSDVNSDSDKTEALQQLVEISSKNDISVWTKYFNQILTAVLEALDDSDPST
RELALSLIFGMLNNQKSEMEDSVEIVIEKLLHVTKDVAVKVSKEANQCLNVVLSEYDPFR
FFSVIVPLLVSDDEKTLVVCISCLTKLVSRLPQDDLMKHLPSFLPALFDAFGNQSPDVRK
TVVFCLVEIYIKLGKSFLPYLEGLSSTQLRLVTIYANRISQARSGAPIDSSH
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcactagaggcggcgcgggctaaggacaccaaggagcgaatggccggcgtg
gagaggctcctccaggtgctggagtctactacaaggagtctctcatccgccgaagtcacc
tccctcgtcgatacctgcatggatctcttgaaggacagcaacttccgtgtctcccaaggt
gcactccaggcgctgtccgctgctgcagtgctttcgggcgatcacctcaagatccatttc
aacggccttgtgccggctgtcgtcgagaggcttggggatgggaagcagcccgtgagggaa
gcggcgcggcagcttctcattactctcatggaggtatcatccccgacaatcattgttgaa
agagctggaagttatgcatgggcacatcgaagttggagagtgcgtgaagagtttgctcgt
acagtttccacagcagttggactttttgcttcgactgagctacctcttcagcgagtcctt
cttcctcctgttttgcagttattgacagactctaatcaaagtgtaagagaagctgctgct
tcatgtattgaggagatgtatgcacaggtaggaacccaatttcatgaggaattgcaacgt
cactctcttccttcttccatgataaaggaaatcaatgccaggttagaaaagatagaacca
aaggttctgccatctgatggggttagaagtcacatttctaccgacaatagaacagcttct
gcaagtcataagaagagcagcccaaggacaaaaatttctaccagagaaacctcattttct
agtggtgaatttgatattactgaaaagcctgtggtgcctattaaggttttcactgagaag
gagttggtcaaggagatggagaaaataacatctacactagttccagagaaagattggtcg
cttcgtatttctgccatgcaaagagttgaaggccttgtcattggaggtgctgctgattat
caatcatttcctgtgctattattaaagcagctagctcctccgatatgcactcagctatcg
gatcgacgctcaagtattgtgaagcaggcctgccatctgttgaacttgctatcaaaggaa
ttgttgggagactttgaagcttgtgctgagatgttcattccagttcttctaaagcttgtt
gtgataactgttctagtgattgctgagtcggcagaccattgcattaaaactatgttgcgc
aattgcaaagttgctcgtatactccctcggatagctgagattgcaaagagtgataagagc
tctgttcttcgtgctagatgctgcgactatgcacttctaatattggagtactgggctgac
gctccagaaattcagcgtgctgcggatctttatgaggaactaataaaatgttgtgttgca
gatgcaatgagtgaggtgcgctcaactgctcgcacttgctatcggatgttcacaaaaaca
tggcctgaacgctccaggaggcttttcttgtcatttgatcctgccatacaaaggttaata
aatgaagaggatggaagtatacataaacgacatgcttctccttctatacgtgaaagggga
ttacaattatcacacagctcttctcaggcatctcaggcatttagtacaggcatacctgga
tatggaacctctgctattgttgcaatggacaagggtgcaactagttctgttggcacatct
ctttcttcagctggcctcctatcacaatccaagacacttaggaaaaatccagaaagaaca
cttgagagtatgcttgatgcgagcaaacagaaggtatcagctatagaaagtttactgaaa
ggtgtgagcatatctggcaagcaaagcttcacaagtacacgctcgaccagcttggatcta
ggagttgatgctccatctactcgtgatccacaagttccaagtagtgtttcctccaacctt
tttcctgtacagggttcagtattagttgattcaaatgctgcaaacattgcaaaaggcaat
aataggaatggtggttcaaatatgtctgagcacctgacttctcaagtacagttaagcaga
gactcttcaaggtcatcttacttcagcccatctgataccctttcagctttgtcattgtcg
tacatgaaaagatctgaaagattgcaagaaggaagtggtattgaagacaatgttgatctc
aaattttctaggcgaatttcaagtatgccaattgataaacagtatctggaaacaccatat
aaagattctttctatcgagaatcaccgaatagttacattcctaattttcaacgtccactt
cttaggaaacaggtgacaggaagggcgattgcaagtagtagaaaaagttttgatgatagt
caaatccaaggaactgaaatacatagttatatggatggtccagcatctctaaacgatgca
ctcaatgagggattaagcgctagttcagattgggtagcaagggtttctgcctttaattat
cttcggagtttgttgcagcaaggcccaaaaggcattttagaaatcacgcagcattttgag
aaggtcatgaaattatttttcagatacttggatgatccccaccacaaagttgctcaggca
gctttttccactcttgctgaaattattcccgtatgcagaaagccctttgaaagttaccta
gaaagaacattgccacatgtcttttctagattaattgatccaaaggaactggttaggcaa
ccatgttcaacaactttagagatcgttagtaagacatacaatgttgattctcttcttcca
gcacttgttcgttctttggatgaacagagatctccaaaagcaaagcttgctgtcattcaa
tttgcaaataattcgtttaataaacacacaattaacccagaaggtaatagtaatagtggc
tttataaagttatggcttggcaagttatcaccttgggtgaatgataaaaatgtaaggctg
aaggaagcatccatatctggcatcatatctgtttacacccattttgattcaacagcagtc
ttgaattttattctgaatctctctgttgaagaacaaaactcattgagacgggcccttaag
cagtacacaccccgtattgaggttgatctgatgaccttcttgcagaataaaaaagaacgt
caacgttcaaagtctttctatgaccaatcagatgttgttggaagttcttccgaggaaggt
tatgttggaggattaaagaaatctcaccaattgggtcgttattctgctggttcacttgat
gatgaaggtgggcgtaagtggagtttaggtcatgaatcaactgaacttgatgcatccatt
gttcatgtaacttccaatgaaattcaccattccagccaaaatcttgatgagtttatttct
gacccattattgcaaggcactgattcaggtaccaattgcctaaagaaaacagattatgtc
attgaacatgagagttctataccaactccgcgtctcagtatcaatagatttattgtttct
gatggtcataaacctatcgacttgaatcatggtggtgaaattagtaaaggttctgagctt
aaacaccttaaaaatagtcctgtaagagctaacctccaaggtgacagtgggcctagtatt
ccccaacttcttcatcggatttgcaatacaagtgatgttaactcagattcagataaaact
gaggcactgcaacagttggtcgaaatttcatcaaaaaatgatatctctgtctggacaaag
tatttcaatcagatattgacagctgtgctcgaggcattggatgattcagatccttcaaca
agggagcttgctctttctttgatatttggaatgctcaataatcagaagagtgagatggaa
gattctgttgaaattgttattgagaagttgttacatgtgacaaaagatgtagctgtgaag
gtctcaaaggaagcaaaccaatgcttgaatgtagtcctatcagaatatgatccatttaga
ttctttagtgtaattgttcctttgttggtcagtgatgatgaaaagacccttgttgtttgt
atcagttgtttaactaagcttgtcagccgtcttccacaagatgatttgatgaaacacttg
ccgtcatttttacctgccctgttcgatgcatttggaaaccaaagcccagatgtgagaaag
actgtcgttttctgtttggtggaaatatacattaagcttggcaaatcttttttaccttat
ttggagggtctcagtagcacacaactacgactcgtgacaatctacgccaatcgaatctcc
caagctagatctggtgctccaattgattctagtcattag
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