Zingiber officinale (ginger): 122051015
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Entry
122051015 CDS
T08725
Name
(RefSeq) calmodulin-binding transcription activator 3-like isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122051015
Transcription factors [BR:
zof03000
]
Eukaryotic type
Other transcription factors
Others
122051015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
Ank
IQ
Ank_4
Ank_3
TIG
Motif
Other DBs
NCBI-GeneID:
122051015
NCBI-ProteinID:
XP_042467851
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Position
3A:complement(2543660..2554042)
Genome browser
AA seq
996 aa
AA seq
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MADTGRFSLTPQLDIDQILIEAQHRWLRPAEICEILQNYRKFNIAPEPPNRPPSGSVFLF
DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENESFQRRSYWML
EEDLMHIVLVHYLEVKGHKPSSSRTRDVAVLQVNPIESPASSNSFSNHSQLPSQLTDVES
PNSVHNLDYEDAESADNPSSSRHHAFTTMRQYDGGQMKGVQLLDPFVRDPSIYGQVDFQG
QYIEPKSELYSTQGNVSKDWDGTGSQSAFIGSKPQFDLASWNEVLQHAATLQMPSHQPSV
GFREPSIEKFDSNFQATTEGELSSDNINFRPDDCSALRKSAMKIADDDTDSTVTTSIAIE
NDAFVDGSYNRPSLLKQLSLDLSSLQGEGLKKYDSFSRWMSKELGEVVDSQTKANSGVYW
STIGGDIVIGDSYITNQGSVDPYIMSLSLSKDQLFSIIDFYPSWVHSGSETKVLITGTFL
KNDDIEEINWSCMFGEIEVPAKIVGDGILSCSAPPHKCGRVPFYVTCSNRLACSEVREFE
FRETDARHMEEADAHIYNTNEMLLHLRLSKLLSLGFSSENAKEQFLETSLQERLHIWLMN
KFAEDGKGPNIWDEEGQGVLHLSAALGYDWALEPTVAAGVNINFRDAHGWTALHWAAFSG
RERTVGELIAMGASPGLLTDPTLDYPSGRTPADLASANGHKGIAGFLAESSLTSHLSVLT
IEPEGNEIPNLTTLAGARVAEPSFLEVPYGDMQAGLSLQDSLTAVRNASQAAARIYQAFR
VHSFHRRKLSESWDDKSGMSDEQALSLVSIKSQKQGQSVMPLHAAAIRIQNKFRGWKGRK
EFLILRQRVVKIQAHVRGHQVRKHIKNVVWSVGIVEKIILRWRRKGSGLRGFRSESPMES
SSIQCPPAKDDDFLQEGRKQTEVRMQRALARVKSMVQYPEAREQYQRLLAVVTELQESKA
MQESMINETEEVVADDFMLELEELWDGDMLLPNAQP
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcggataccgggcggttctcgttgacccctcagcttgacattgatcagatacttatt
gaagcacaacatcggtggttgcgccctgctgaaatttgtgaaatactacagaactacagg
aagttcaatattgcgccagaaccaccaaatagaccacccagtggatctgtttttctcttt
gatcgcaaagtattgagatacttcaggaaagatggtcataattggagaaagaagaaggat
gggaagactgtaaaagaagctcatgagagactaaaggctgggagtgttgatgtgcttcat
tgctactatgctcatggtgaagagaatgaaagttttcagaggaggagttattggatgttg
gaagaggacttgatgcacattgtgcttgtccactatcttgaagtgaagggtcacaaacca
agttccagccgcactagagatgttgcagttctacaagttaaccccattgagagtcctgca
tcttctaattcctttagtaaccacagccaactgccttcacaattaaccgatgttgaaagc
cccaacagtgtacacaatttagattatgaagatgctgaatcagcagataatccatcaagt
tccagacaccacgctttcactacgatgcggcagtatgatggtggacaaatgaagggtgtt
cagttattggacccttttgttcgtgatccttccatatatggtcaagttgattttcaagga
cagtacatagaaccaaaatcagagctttattctactcagggaaatgtaagcaaagactgg
gatggaacaggttctcagtctgcatttattgggtccaaaccacagtttgatctagcctca
tggaatgaagttctgcaacatgcagcaacacttcaaatgccatctcaccagccatcagtt
ggctttagagagccttccatagagaaatttgatagtaattttcaagctaccacagaggga
gaactatcttcagataatatcaactttaggccagatgattgcagtgctttaagaaaatct
gcaatgaagattgctgatgatgacactgattcaaccgttacaacaagcattgccatagaa
aatgatgcatttgtagatggaagttataatcgcccttcccttttgaagcagttgtcattg
gacctctccagtttacaaggtgaaggtctgaagaagtatgatagcttctccaggtggatg
agcaaagaactaggggaggttgtggactcacagacaaaagccaattctggagtatactgg
agcactataggaggtgatattgttattggagattcttacattacaaatcaagggtctgta
gatccatacataatgagcctttcactttcaaaagatcagcttttcagtataattgacttc
tatccaagctgggttcattcaggatcagagactaaggtgttaattactgggacatttttg
aagaatgatgacattgaggaaattaattggtcatgcatgtttggggaaattgaagttcca
gcaaagattgtaggagatggaatacttagctgcagtgctccaccacataaatgcggaagg
gttcctttttatgtgacgtgctctaacaggcttgcttgcagtgaagtaagagagtttgaa
ttccgtgaaactgatgctcgccatatggaggaggcagatgctcatatttataacacaaat
gaaatgcttcttcatttgcgtcttagtaagctactctctctggggttttcttctgaaaat
gcaaaagaacaatttcttgaaacatcattacaagagaggctgcatatttggcttatgaac
aaatttgctgaagatggtaaaggccccaacatctgggatgaggagggccagggtgtgcta
catttgtcagctgctcttggatatgattgggctctagaaccaacagtagctgcaggtgtc
aacataaacttcagagatgcacatgggtggaccgcccttcactgggcagcatttagtggc
agggagcgtacagttggtgaacttattgcaatgggtgcatcacctggtttattgactgat
ccaactcttgactatccttctgggagaactcctgctgacttagcatcagcaaatggtcat
aaagggattgctggttttcttgcagaatcatctttgaccagccatctttcagtcctcact
atcgagccagaagggaatgaaataccaaatttaactaccttggcaggtgcacgtgttgca
gaacctagtttccttgaggttccatatggtgatatgcaggctgggctttcacttcaggac
tcgttgactgcagttcgcaatgcctctcaagctgcagctcggatataccaagcctttaga
gtgcattcatttcacagaaggaagctttctgagagttgggatgataagtctggaatgtct
gatgagcaagcattgtcacttgtatctattaaatcacaaaaacaaggacagtctgttatg
cctctacatgctgctgccattcgtatacaaaacaaatttagagggtggaaagggagaaag
gaatttctaatattaaggcaacgagtggtcaagatccaggctcatgtacgtggtcaccaa
gtgaggaaacacattaaaaatgttgtttggtcagtaggaatcgtggagaaaattatactc
cgctggagacgaaaaggaagtgggttgcgtggttttcggtctgaaagcccaatggagagc
tcttccattcaatgcccaccggctaaggatgatgatttcctacaagaaggcagaaaacag
actgaggttaggatgcagagagcacttgcaagggtaaagtctatggttcagtatccagaa
gctagagaacagtatcaaagacttctagctgttgttaccgaactacaagaatccaaggca
atgcaagagagcatgataaatgagacagaggaggtcgtggctgacgacttcatgcttgag
ctcgaagagttgtgggacggggacatgcttctgcccaatgctcaaccttga
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