Zingiber officinale (ginger): 122051055
Help
Entry
122051055 CDS
T08725
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122051055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122051055
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122051055
Pre-60S particles
122051055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_6
Importin_rep_4
HEAT
HEAT_EF3_N
HEAT_2
MMS19_C
TOR1L1_N
Vac14_Fab1_bd
RIX1
Cnd1
IFRD
Htt_N-HEAT_1
INTS7_N
Arm
Adaptin_N
ParcG
HEAT_Maestro
TPR_TNPO3_IPO13_3rd
PPP2R1A-like_HEAT
DUF6720
GNC1_N
Motif
Other DBs
NCBI-GeneID:
122051055
NCBI-ProteinID:
XP_042467917
LinkDB
All DBs
Position
3A:3488490..3501161
Genome browser
AA seq
1118 aa
AA seq
DB search
MDQQQQIAVILGSAESGPFESLIGQLMSASNEQRSHAESLFNLCRDLHPDALALKLASVL
HSSPALDFRAMSAVLLRKLLTHRDSDAPFWPRLSPSSQTSLKSLLLAVLHQEPDRSTAKK
VADTISALAVSLLPESAWPDLLPFLFHAVSASDASPRLQESALLIFSQIAYVLADDASFI
GPHLTTLHSLLLAALSHSSAPDVRVAALSAAVNLVTSLESTADRNRLAELLPAMMRTLTE
SLNSGHEAAAQEALELLVELAGAEPRFLRRQIGDVVGAMMQIAEADGLEEGTRHLAIEFV
ITLAEARERAPGMMRKLPQFLSRLFAVLMKMLLDLEDDPAWHTAEVQDEDAGETSNYGVA
QECLDRLAIAVGGNTIVPVASELLPAYLAAPEWQKHHAALVALAQIAEGCSKVMLKNLEQ
VVTMVLSSFQDPHPRVRWAAINAIGQLSTDLGPDLQLQYHQRVLPALASAMDDFQNPRVQ
AHASSAVLNFCENCTPDILTPYLDGIVGKLLVLLQNGNQMVQEGALTALASVADSSQEQF
QKYYDAVMPYLKVILMNATNKSNRMLRAKSMECISLVGMAVGKEKFRDDAKQVMEVLMAL
QGSQMETDDPTTSYMLQAWARLCKCLGQDFLPYMNVVMPPLLQSAQLKPDVTITSAGSDD
DIEDSDDESVETITLGDKRIGIRTSVLEEKATACNMLCCYADELKEGFYPWIDQVAPTLV
PLLKFYFHEEVRKAAVAAMPELLRSAKLAVEKGQAQGRDESYVKQLSDYIIPALVEALQK
EPETEICASMLDSLNECMQLSGSLLSEDQVKSIVDQIKHVITASASRKKERAERTKAEDF
DAEEEEILKEENEQEEEVFDQIGDCLGTLIKTFKASFLPFFDELSLYITPMLGKDKTPEE
RRIAICIFVDVAEQCQEAALRYYDTYLPFLLEACNDDNADVRQAAVYGVGVCAEFGGSVF
RPLVGEALSSLNNVIGHPDALQSDNVMAYDNAVSALGKICQFHRDGIDAAKVVPAWLGCL
PIKNDLIEAKIVHEQLCSMVERSDRDLLGPNNQQIPKLVAVFAEVLCGGKDLASEQTVSR
IISLLRQIQQTLPPAVLASTWSTLQPQQQLALQSVLSS
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcagcagcagattgcggtgattctcggctcggcggaatcaggccccttcgag
tctctgatcggccagttgatgtccgcctccaacgagcagcggtcccacgccgagtccctc
ttcaatctctgccgcgacctgcacccggacgccctagcccttaagctcgcctccgtcctc
cactcttccccggcgctggacttccgcgccatgtccgccgtcctcctccgcaagctcctc
acacaccgtgactccgacgcacccttctggccccggctctcaccatcctcccagacctct
ctcaagtctctcctcctcgccgtcctccaccaggagcccgaccgctccactgccaagaag
gtcgccgacaccatctccgccctcgccgtctccctcctccccgagtcggcctggcccgat
cttcttcccttcctcttccacgccgtctccgcctccgacgcttcccctcgtctccaggag
tctgctctcctcatattttcccagattgcctatgtcctcgcggacgatgcctccttcatc
ggcccccacctcaccaccctccactcccttctccttgccgcactctcccactcttccgct
cccgatgttcgcgttgctgcactctctgctgcagtcaacctcgtcacttccctggagtct
actgcggatcgtaaccgcctagctgagcttctccctgccatgatgcgaacacttactgag
tctctcaattctggccacgaagctgccgcacaggaggctcttgaactccttgttgaactc
gcaggcgcagaaccaaggttccttcgccgtcagattggcgatgttgttggagccatgatg
cagattgccgaggcagatggacttgaggagggtactcgccacttagctattgagttcgtt
atcacccttgctgaagcaagggagcgagcccctgggatgatgcggaagctcccccagttt
ctcagcagactatttgctgtgctcatgaaaatgctccttgatttagaggatgatcctgct
tggcacactgctgaggttcaggatgaggatgctggagaaactagcaactatggcgttgca
caggaatgccttgaccgtcttgcaattgcagttggtggaaacacaatcgttccagtagcc
tcggagctcttaccagcttacctggctgcccctgagtggcagaaacaccatgcagctctt
gtcgctcttgcacagatagctgaaggttgttcaaaggtgatgttaaaaaatctggaacaa
gtagtgaccatggttctaagctctttccaagatccccatcctcgtgttcgctgggcagca
attaatgccattggtcagttgtccacagatttggggccagatttgcaactccaatatcat
cagagggtgcttcctgcattggcatcagcgatggatgatttccagaatcctcgtgtgcag
gctcatgcatcttcagctgttttgaatttctgtgaaaattgcactcctgatattttgaca
ccttacctagatggaatcgtagggaagttactagttctgctacagaatgggaaccagatg
gttcaagaaggagctttaacagctttagcttcagtggcagattcatcacaagaacaattt
cagaagtactatgatgccgttatgccttacctcaaagtgatattgatgaatgcgactaat
aaatcaaacaggatgcttcgtgcaaaatcaatggagtgcataagtttggtaggaatggca
gtgggcaaggaaaagttcagggatgatgctaaacaggtaatggaagttttgatggcattg
caaggatcacaaatggagacggatgatcctactacaagctatatgcttcaggcatgggcc
aggttatgcaaatgcctaggacaggattttctgccatacatgaatgttgttatgccccca
ttgcttcaatctgcccagctgaaaccagatgtaactatcacatctgcaggttcagatgat
gacatagaagattcagatgatgaaagtgttgaaaccattactcttggagataaaaggata
ggaattcggacaagtgtattggaggagaaagccactgcttgtaacatgctatgctgctat
gctgatgagctaaaagagggcttctatccgtggattgatcaggtcgctcctacactggta
cctttacttaaattctatttccatgaagaagtaaggaaggctgctgttgcagctatgccg
gaattactccgatcggcaaaactagctgttgaaaaggggcaagctcaaggccgtgatgaa
tcatatgttaagcaattatcagactacataatcccagctcttgttgaagcattgcagaag
gaaccagaaacagaaatctgtgcaagcatgctggattcactgaatgagtgcatgcagtta
agtgggtcacttctcagtgaagaccaggttaaaagcatagttgatcaaataaagcatgtg
ataactgccagtgcatctaggaaaaaagaaagagccgaaaggacgaaagctgaggatttt
gatgccgaggaagaggaaatcctcaaggaagaaaatgagcaggaggaagaagtgtttgat
cagattggggattgccttggaactctgattaagaccttcaaggcgtctttcctgccgttc
tttgacgagctctctctttatattactccaatgctgggaaaggataaaacacctgaggag
agaaggattgctatttgcatttttgttgatgttgcagaacaatgccaggaagcagctctt
agatactacgatacctaccttcctttcctattagaagcatgcaatgatgataatgcagat
gttaggcaggctgctgtttatggtgttggtgtttgtgctgaatttggtggatcagtgttt
cggcctttggttggagaggctctctctagtttgaataatgtgattggacatcctgatgca
ttgcaatcggacaatgtaatggcatatgacaatgctgtttcagcacttggtaaaatatgt
caattccatcgtgatggtattgatgcagctaaggttgttccagcttggttgggttgcttg
ccaataaagaatgatttaattgaggccaaaattgttcatgaacaactctgttcaatggtt
gaaaggtcagatagggatcttttgggtcctaacaatcagcaaattcctaaactagttgcg
gtgtttgcagaggttctatgcggagggaaggatctggcttcggaacagactgttagtaga
atcatcagtctcttgagacagattcaacaaacactcccacctgctgtcctcgcctctacc
tggtctaccctgcagcctcagcaacagcttgctttgcaatctgtattatcatcgtaa
DBGET
integrated database retrieval system
